RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 LMBR1LQ6UX01 489 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
NUP58-206ENST00000463407 CCDC12Q8WUD4 166 aaPredicted RBP14.91□□□□□ -0.02
NUP58-206ENST00000463407 SH2B1Q9NRF2 756 aaPredicted RBP14.91□□□□□ -0.02
NUP58-206ENST00000463407 TSHZ3Q63HK5 1081 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 VEZTQ9HBM0 779 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 GRM8O00222 908 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 MPHOSPH6Q99547 160 aaKnown RBP14.91□□□□□ -0.02
NUP58-206ENST00000463407 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 HSP90B2PQ58FF3 399 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 IP6K1Q92551 441 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 SHANK2Q9UPX8 1470 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 CAMK4Q16566 473 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 TSG101Q99816 390 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
NUP58-206ENST00000463407 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 EIF5P55010 431 aaKnown RBP14.9□□□□□ -0.02
NUP58-206ENST00000463407 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
NUP58-206ENST00000463407 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
NUP58-206ENST00000463407 CCNL1Q9UK58 526 aaPredicted RBP14.9□□□□□ -0.02
NUP58-206ENST00000463407 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
NUP58-206ENST00000463407 NF2P35240 595 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 IRS4O14654 1257 aaPredicted RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 NCOA7Q8NI08 942 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 RBM17Q96I25 401 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 LARP6Q9BRS8 491 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 ORAI2Q96SN7 254 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 EYA1Q99502 592 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 NAA16Q6N069 864 aaPredicted RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 NSFL1CQ9UNZ2 370 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 SMTNL1A8MU46 457 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
NUP58-206ENST00000463407 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
NUP58-206ENST00000463407 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 CCDC181Q5TID7 509 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 RHPN1Q8TCX5 695 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
NUP58-206ENST00000463407 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 RAB11FIP4Q86YS3 637 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 C8orf58Q8NAV2 365 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 STX8Q9UNK0 236 aa14.88□□□□□ -0.03
NUP58-206ENST00000463407 HMGN5P82970 282 aaKnown RBP14.87□□□□□ -0.03
NUP58-206ENST00000463407 GRPEL1Q9HAV7 217 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 USP16Q9Y5T5 823 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MCM4P33991 863 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MAP3K11Q16584 847 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MPNDQ8N594 471 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MEIS3Q99687 375 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
NUP58-206ENST00000463407 USP21Q9UK80 565 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 LMOD1P29536 600 aaPredicted RBP14.87□□□□□ -0.03
NUP58-206ENST00000463407 IL15P40933 162 aaPredicted RBP14.87□□□□□ -0.03
NUP58-206ENST00000463407 METAP2P50579 478 aaKnown RBP eCLIP14.87□□□□□ -0.03
NUP58-206ENST00000463407 TBC1D9Q6ZT07 1266 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 ERLIN2O94905 339 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 IARSP41252 1262 aaKnown RBP14.87□□□□□ -0.03
NUP58-206ENST00000463407 EYA3Q99504 573 aa14.87□□□□□ -0.03
NUP58-206ENST00000463407 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
NUP58-206ENST00000463407 MRPL50Q8N5N7 158 aaKnown RBP14.86□□□□□ -0.03
NUP58-206ENST00000463407 NEK1Q96PY6 1258 aa14.86□□□□□ -0.03
NUP58-206ENST00000463407 IGHDP01880 384 aa14.86□□□□□ -0.03
NUP58-206ENST00000463407 KLHL10Q6JEL2 608 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 CCDC150Q8NCX0 1101 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 SLC26A6Q9BXS9 759 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 DNMT1P26358 1616 aaKnown RBP14.85□□□□□ -0.03
NUP58-206ENST00000463407 ZNF397Q8NF99 534 aaPredicted RBP14.85□□□□□ -0.03
NUP58-206ENST00000463407 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 HELBQ8NG08 1087 aaPredicted RBP14.85□□□□□ -0.03
NUP58-206ENST00000463407 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 MAGEB6P1A0A0J9YX57 407 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 KRT23Q9C075 422 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 GJA3Q9Y6H8 435 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
NUP58-206ENST00000463407 ZFYP08048 801 aaPredicted RBP14.84□□□□□ -0.03
NUP58-206ENST00000463407 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
NUP58-206ENST00000463407 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 SLAIN2Q9P270 581 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 WTAPQ15007 396 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 CCDC178Q5BJE1 867 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 IFIT1BQ5T764 474 aaKnown RBP14.84□□□□□ -0.03
NUP58-206ENST00000463407 SYCE3A1L190 88 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 CNBD1Q8NA66 436 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 ZFYVE9O95405 1425 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 MAP3K19Q56UN5 1328 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
NUP58-206ENST00000463407 PLS1Q14651 629 aa14.83□□□□□ -0.03
NUP58-206ENST00000463407 BMP2KLQ5H9B9 411 aa14.83□□□□□ -0.03
NUP58-206ENST00000463407 SLC9C2Q5TAH2 1124 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms