RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
SSBP1-203ENST00000463093 GRIN3BO60391 1043 aa17.39■□□□□ 0.37
SSBP1-203ENST00000463093 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
SSBP1-203ENST00000463093 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
SSBP1-203ENST00000463093 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
SSBP1-203ENST00000463093 WWC3Q9ULE0 1092 aa17.39■□□□□ 0.37
SSBP1-203ENST00000463093 AFDNP55196 1824 aaKnown RBP17.39■□□□□ 0.37
SSBP1-203ENST00000463093 ADCY9O60503 1353 aa17.39■□□□□ 0.37
SSBP1-203ENST00000463093 SRGNP10124 158 aa17.38■□□□□ 0.37
SSBP1-203ENST00000463093 DALRD3Q5D0E6 543 aaKnown RBP17.38■□□□□ 0.37
SSBP1-203ENST00000463093 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
SSBP1-203ENST00000463093 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
SSBP1-203ENST00000463093 CACNA1FO60840 1977 aa17.38■□□□□ 0.37
SSBP1-203ENST00000463093 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
SSBP1-203ENST00000463093 KIF13BQ9NQT8 1826 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 NEXNQ0ZGT2 675 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 SYNE4Q8N205 404 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 ZNF622Q969S3 477 aaKnown RBP eCLIP17.37■□□□□ 0.37
SSBP1-203ENST00000463093 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
SSBP1-203ENST00000463093 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
SSBP1-203ENST00000463093 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
SSBP1-203ENST00000463093 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
SSBP1-203ENST00000463093 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-203ENST00000463093 F6X3S4 739 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 NPR1P16066 1061 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
SSBP1-203ENST00000463093 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SSBP1-203ENST00000463093 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
SSBP1-203ENST00000463093 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
SSBP1-203ENST00000463093 NEURL1BA8MQ27 555 aa17.34■□□□□ 0.37
SSBP1-203ENST00000463093 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
SSBP1-203ENST00000463093 LINS1Q8NG48 757 aa17.34■□□□□ 0.37
SSBP1-203ENST00000463093 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
SSBP1-203ENST00000463093 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
SSBP1-203ENST00000463093 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
SSBP1-203ENST00000463093 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-203ENST00000463093 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-203ENST00000463093 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
SSBP1-203ENST00000463093 PTPRCP08575 1304 aa17.32■□□□□ 0.36
SSBP1-203ENST00000463093 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
SSBP1-203ENST00000463093 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-203ENST00000463093 BEND3Q5T5X7 828 aa17.32■□□□□ 0.36
SSBP1-203ENST00000463093 H7C1W4 665 aa17.31■□□□□ 0.36
SSBP1-203ENST00000463093 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-203ENST00000463093 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
SSBP1-203ENST00000463093 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
SSBP1-203ENST00000463093 GCKRQ14397 625 aa17.31■□□□□ 0.36
SSBP1-203ENST00000463093 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-203ENST00000463093 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
SSBP1-203ENST00000463093 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-203ENST00000463093 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
SSBP1-203ENST00000463093 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
SSBP1-203ENST00000463093 RPGRQ92834 1020 aaKnown RBP17.3■□□□□ 0.36
SSBP1-203ENST00000463093 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
SSBP1-203ENST00000463093 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
SSBP1-203ENST00000463093 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
SSBP1-203ENST00000463093 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
SSBP1-203ENST00000463093 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
SSBP1-203ENST00000463093 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
SSBP1-203ENST00000463093 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
SSBP1-203ENST00000463093 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
SSBP1-203ENST00000463093 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
SSBP1-203ENST00000463093 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
SSBP1-203ENST00000463093 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
SSBP1-203ENST00000463093 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
SSBP1-203ENST00000463093 C21orf2O43822 256 aa17.27■□□□□ 0.36
SSBP1-203ENST00000463093 PDE8AO60658 829 aa17.27■□□□□ 0.36
SSBP1-203ENST00000463093 BCAR3O75815 825 aa17.27■□□□□ 0.36
SSBP1-203ENST00000463093 ARFGEF2Q9Y6D5 1785 aa17.26■□□□□ 0.35
SSBP1-203ENST00000463093 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
SSBP1-203ENST00000463093 BBOX1O75936 387 aa17.26■□□□□ 0.35
SSBP1-203ENST00000463093 CASP7P55210 303 aa17.26■□□□□ 0.35
SSBP1-203ENST00000463093 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
SSBP1-203ENST00000463093 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
SSBP1-203ENST00000463093 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
SSBP1-203ENST00000463093 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
SSBP1-203ENST00000463093 PLA2G12BQ9BX93 195 aa17.25■□□□□ 0.35
SSBP1-203ENST00000463093 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-203ENST00000463093 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
SSBP1-203ENST00000463093 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
SSBP1-203ENST00000463093 C9orf78Q9NZ63 289 aaPredicted RBP17.24■□□□□ 0.35
SSBP1-203ENST00000463093 GRM8O00222 908 aa17.23■□□□□ 0.35
SSBP1-203ENST00000463093 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
SSBP1-203ENST00000463093 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
SSBP1-203ENST00000463093 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
SSBP1-203ENST00000463093 SLX4Q8IY92 1834 aa17.22■□□□□ 0.35
SSBP1-203ENST00000463093 GRAPQ13588 217 aa17.22■□□□□ 0.35
SSBP1-203ENST00000463093 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
SSBP1-203ENST00000463093 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
SSBP1-203ENST00000463093 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SSBP1-203ENST00000463093 ABCC4O15439 1325 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 CSF1RP07333 972 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.35
SSBP1-203ENST00000463093 CTSWP56202 376 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms