RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 C2CD5Q86YS7 1000 aa10.84□□□□□ -0.67
GARNL3-212ENST00000463005 SLC52A2Q9HAB3 445 aa10.84□□□□□ -0.67
GARNL3-212ENST00000463005 POTECB2RU33 542 aa10.83□□□□□ -0.68
GARNL3-212ENST00000463005 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
GARNL3-212ENST00000463005 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
GARNL3-212ENST00000463005 TIAM2Q8IVF5 1701 aa10.83□□□□□ -0.68
GARNL3-212ENST00000463005 FER1L6Q2WGJ9 1857 aa10.83□□□□□ -0.68
GARNL3-212ENST00000463005 COL15A1P39059 1388 aa10.82□□□□□ -0.68
GARNL3-212ENST00000463005 A0A087WZG4 1122 aa10.82□□□□□ -0.68
GARNL3-212ENST00000463005 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
GARNL3-212ENST00000463005 MORC1Q86VD1 984 aa10.82□□□□□ -0.68
GARNL3-212ENST00000463005 PANK3Q9H999 370 aa10.82□□□□□ -0.68
GARNL3-212ENST00000463005 NFKBIEO00221 500 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 GPR37O15354 613 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
GARNL3-212ENST00000463005 IL13P35225 146 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 PDE6BP35913 854 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 LGR6Q9HBX8 967 aa10.81□□□□□ -0.68
GARNL3-212ENST00000463005 EVI5O60447 810 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 STARD3NLO95772 234 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 OSBPP22059 807 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 BRIP1Q9BX63 1249 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 ZBTB1Q9Y2K1 713 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 LTBP3Q9NS15 1303 aa10.8□□□□□ -0.68
GARNL3-212ENST00000463005 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
GARNL3-212ENST00000463005 EIF5P55010 431 aaKnown RBP10.79□□□□□ -0.68
GARNL3-212ENST00000463005 SLC39A6Q13433 755 aa10.79□□□□□ -0.68
GARNL3-212ENST00000463005 ZNF622Q969S3 477 aaKnown RBP eCLIP10.79□□□□□ -0.68
GARNL3-212ENST00000463005 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-212ENST00000463005 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
GARNL3-212ENST00000463005 SCN4AP35499 1836 aa10.79□□□□□ -0.68
GARNL3-212ENST00000463005 ANKRD31Q8N7Z5 1873 aa10.78□□□□□ -0.68
GARNL3-212ENST00000463005 C21orf2O43822 256 aa10.78□□□□□ -0.68
GARNL3-212ENST00000463005 CANXP27824 592 aaKnown RBP10.78□□□□□ -0.68
GARNL3-212ENST00000463005 SOGA3Q5TF21 947 aa10.78□□□□□ -0.68
GARNL3-212ENST00000463005 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
GARNL3-212ENST00000463005 CNKSR1Q969H4 720 aa10.78□□□□□ -0.68
GARNL3-212ENST00000463005 PCNTO95613 3336 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 MRC1P22897 1456 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 IQCA1LA6NCM1 817 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
GARNL3-212ENST00000463005 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 TTC5Q8N0Z6 440 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
GARNL3-212ENST00000463005 KNSTRNQ9Y448 316 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 UBR2Q8IWV8 1755 aa10.77□□□□□ -0.69
GARNL3-212ENST00000463005 DDNO94850 711 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-212ENST00000463005 IL6STP40189 918 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-212ENST00000463005 TBC1D9BQ66K14 1250 aa10.76□□□□□ -0.69
GARNL3-212ENST00000463005 STYK1Q6J9G0 422 aa10.76□□□□□ -0.69
GARNL3-212ENST00000463005 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
GARNL3-212ENST00000463005 CACNA1SQ13698 1873 aa10.76□□□□□ -0.69
GARNL3-212ENST00000463005 CARMIL3Q8ND23 1372 aa10.76□□□□□ -0.69
GARNL3-212ENST00000463005 SLX4Q8IY92 1834 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 CTCFP49711 727 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-212ENST00000463005 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
GARNL3-212ENST00000463005 PRR5LQ6MZQ0 368 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 LDHDQ86WU2 507 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
GARNL3-212ENST00000463005 AIDAQ96BJ3 306 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
GARNL3-212ENST00000463005 PASKQ96RG2 1323 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 CNTNAP1P78357 1384 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
GARNL3-212ENST00000463005 FOXN1O15353 648 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 SRGNP10124 158 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 FECHP22830 423 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 ST5P78524 1137 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
GARNL3-212ENST00000463005 TMEM88BA6NKF7 163 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 NPHP1O15259 732 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 TBC1D12O60347 775 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 HMOX1P09601 288 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 ZNF790Q6PG37 636 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 CNBD1Q8NA66 436 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 TAF1DQ9H5J8 278 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-212ENST00000463005 HEG1Q9ULI3 1381 aa10.73□□□□□ -0.69
GARNL3-212ENST00000463005 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 ITGBL1O95965 494 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 HSPA5P11021 654 aaKnown RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 TEFQ10587 303 aa10.72□□□□□ -0.69
GARNL3-212ENST00000463005 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
GARNL3-212ENST00000463005 PRPF40BQ6NWY9 871 aaKnown RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 ZNF496Q96IT1 587 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-212ENST00000463005 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
GARNL3-212ENST00000463005 SCN7AQ01118 1682 aa10.72□□□□□ -0.69
GARNL3-212ENST00000463005 GNAT3A8MTJ3 354 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 VEGFBP49765 207 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 CLEC4GQ6UXB4 293 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 PNMA8AQ86V59 439 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-212ENST00000463005 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms