RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	CDCA7L	Q96GN5	454 aa		12.33	□□□□□ -0.44
PSMD4-208	ENST00000462970	UTRN	P46939	3433 aa		12.33	□□□□□ -0.44
PSMD4-208	ENST00000462970	ARFGEF1	Q9Y6D6	1849 aa		12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	VAMP4	O75379	141 aa		12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	KCNA3	P22001	575 aa		12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	TCIRG1	Q13488	830 aa		12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	MYD88	Q99836	296 aa		12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	UTP14A	Q9BVJ6	771 aa	Known RBP	12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.32	□□□□□ -0.44
PSMD4-208	ENST00000462970	ABCC12	Q96J65	1359 aa		12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	GOLGB1	Q14789	3259 aa	Known RBP	12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	SLFN5	Q08AF3	891 aa		12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	RTL5	Q5HYW3	569 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	G2E3	Q7L622	706 aa		12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	NLRP10	Q86W26	655 aa		12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	TRMT112	Q9UI30	125 aa	Known RBP	12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	MAP3K2	Q9Y2U5	619 aa		12.31	□□□□□ -0.44
PSMD4-208	ENST00000462970	NTSR2	O95665	410 aa		12.3	□□□□□ -0.44
PSMD4-208	ENST00000462970	FKBP5	Q13451	457 aa	Predicted RBP	12.3	□□□□□ -0.44
PSMD4-208	ENST00000462970	TTLL6	Q8N841	843 aa		12.3	□□□□□ -0.44
PSMD4-208	ENST00000462970	PI4KAP2	A4QPH2	592 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	HCLS1	P14317	486 aa	Predicted RBP	12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	FLII	Q13045	1269 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	KSR2	Q6VAB6	950 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	SYNE4	Q8N205	404 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	PI4KAP1	Q8N8J0	262 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	RPGR	Q92834	1020 aa	Known RBP	12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	PDZRN3	Q9UPQ7	1066 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	SLX4	Q8IY92	1834 aa		12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.29	□□□□□ -0.44
PSMD4-208	ENST00000462970	LAMB2	P55268	1798 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	SRGN	P10124	158 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	NPR1	P16066	1061 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	NEXN	Q0ZGT2	675 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	STYK1	Q6J9G0	422 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	CNKSR1	Q969H4	720 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	FAM89A	Q96GI7	184 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	MASTL	Q96GX5	879 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	ISCA1	Q9BUE6	129 aa		12.28	□□□□□ -0.44
PSMD4-208	ENST00000462970	CCDC88A	Q3V6T2	1871 aa		12.27	□□□□□ -0.44
PSMD4-208	ENST00000462970	C21orf2	O43822	256 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	C1QTNF8	P60827	252 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	PRPF40B	Q6NWY9	871 aa	Known RBP	12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	JARID2	Q92833	1246 aa	Predicted RBP	12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	NLRP3	Q96P20	1036 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	METTL22	Q9BUU2	404 aa	Predicted RBP	12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	BCL2L13	Q9BXK5	485 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	SH3TC1	Q8TE82	1336 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	ADCY9	O60503	1353 aa		12.27	□□□□□ -0.45
PSMD4-208	ENST00000462970	C3orf67	Q6ZVT6	689 aa		12.26	□□□□□ -0.45
PSMD4-208	ENST00000462970	ZNF526	Q8TF50	670 aa	Predicted RBP	12.26	□□□□□ -0.45
PSMD4-208	ENST00000462970	CWC25	Q9NXE8	425 aa	Predicted RBP	12.26	□□□□□ -0.45
PSMD4-208	ENST00000462970	DDX60	Q8IY21	1712 aa	Known RBP	12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	TAF1	P21675	1872 aa		12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970		F6X3S4	739 aa		12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	RASSF7	Q02833	373 aa		12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	CWF19L2	Q2TBE0	894 aa	Known RBP	12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	RBM17	Q96I25	401 aa	Known RBP	12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	SMC4	Q9NTJ3	1288 aa		12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	RNF123	Q5XPI4	1314 aa		12.25	□□□□□ -0.45
PSMD4-208	ENST00000462970	IRS4	O14654	1257 aa	Predicted RBP	12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	SBF1	O95248	1867 aa		12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	ALDH1B1	P30837	517 aa		12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	HOXD11	P31277	338 aa	Predicted RBP	12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	SLC4A10	Q6U841	1118 aa		12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	CCDC191	Q8NCU4	936 aa		12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	DNAAF4	Q8WXU2	420 aa		12.24	□□□□□ -0.45
PSMD4-208	ENST00000462970	RIC1	Q4ADV7	1423 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	KLRG2	A4D1S0	409 aa	Predicted RBP	12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	IGKV5-2	P06315	115 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	TRIM28	Q13263	835 aa	Known RBP	12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	SLC10A5	Q5PT55	438 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	OLFM4	Q6UX06	510 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	MRPL50	Q8N5N7	158 aa	Known RBP	12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	SSH1	Q8WYL5	1049 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	RNF181	Q9P0P0	153 aa		12.23	□□□□□ -0.45
PSMD4-208	ENST00000462970	MYH3	P11055	1940 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	NEURL1B	A8MQ27	555 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	PCCA	P05165	728 aa	Predicted RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	CRY2	Q49AN0	593 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	C9orf131	Q5VYM1	1079 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	DDX46	Q7L014	1031 aa	Known RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	UBE3B	Q7Z3V4	1068 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	TRMT2A	Q8IZ69	625 aa	Known RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	TMX4	Q9H1E5	349 aa	Predicted RBP	12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	FER1L6	Q2WGJ9	1857 aa		12.22	□□□□□ -0.45
PSMD4-208	ENST00000462970	PPEF1	O14829	653 aa	Predicted RBP	12.21	□□□□□ -0.45
PSMD4-208	ENST00000462970	HSP90B1	P14625	803 aa	Known RBP	12.21	□□□□□ -0.45
PSMD4-208	ENST00000462970	CCDC93	Q567U6	631 aa		12.21	□□□□□ -0.45
PSMD4-208	ENST00000462970	SOGA3	Q5TF21	947 aa		12.21	□□□□□ -0.45
PSMD4-208	ENST00000462970	CRAMP1	Q96RY5	1269 aa		12.21	□□□□□ -0.45
PSMD4-208	ENST00000462970	ABCC4	O15439	1325 aa		12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	ZBED9	Q6R2W3	1325 aa		12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	HOXA10	P31260	410 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	ALDH1L2	Q3SY69	923 aa		12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	LINS1	Q8NG48	757 aa		12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	SPEF2	Q9C093	1822 aa		12.2	□□□□□ -0.46
PSMD4-208	ENST00000462970	NFKBIE	O00221	500 aa		12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms