RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HACL1Q9UJ83 578 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
SMC3-202ENST00000462899 MAP2K1Q02750 393 aaPredicted RBP10.53□□□□□ -0.72
SMC3-202ENST00000462899 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
SMC3-202ENST00000462899 MAP1SQ66K74 1059 aaPredicted RBP10.53□□□□□ -0.72
SMC3-202ENST00000462899 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
SMC3-202ENST00000462899 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
SMC3-202ENST00000462899 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
SMC3-202ENST00000462899 MLLT1Q03111 559 aaPredicted RBP10.52□□□□□ -0.73
SMC3-202ENST00000462899 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
SMC3-202ENST00000462899 OLFM4Q6UX06 510 aa10.52□□□□□ -0.73
SMC3-202ENST00000462899 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
SMC3-202ENST00000462899 MORC1Q86VD1 984 aa10.52□□□□□ -0.73
SMC3-202ENST00000462899 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
SMC3-202ENST00000462899 DDX21Q9NR30 783 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC3-202ENST00000462899 HMOX1P09601 288 aa10.51□□□□□ -0.73
SMC3-202ENST00000462899 ST5P78524 1137 aa10.51□□□□□ -0.73
SMC3-202ENST00000462899 GPC2Q8N158 579 aa10.51□□□□□ -0.73
SMC3-202ENST00000462899 TEX13AQ9BXU3 409 aaPredicted RBP10.51□□□□□ -0.73
SMC3-202ENST00000462899 ZNF277Q9NRM2 450 aaPredicted RBP10.51□□□□□ -0.73
SMC3-202ENST00000462899 A1BGP04217 495 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 NPR1P16066 1061 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 IARSP41252 1262 aaKnown RBP10.5□□□□□ -0.73
SMC3-202ENST00000462899 CLEC4GQ6UXB4 293 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 TTC5Q8N0Z6 440 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
SMC3-202ENST00000462899 SCNN1DP51172 638 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 CLCN6P51797 869 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 FMR1Q06787 632 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMC3-202ENST00000462899 CST9Q5W186 159 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
SMC3-202ENST00000462899 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 PSMD1Q99460 953 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 LAMB2P55268 1798 aa10.49□□□□□ -0.73
SMC3-202ENST00000462899 KDM3BQ7LBC6 1761 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 CRY2Q49AN0 593 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 CYP4F22Q6NT55 531 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 DZIP3Q86Y13 1208 aaKnown RBP10.48□□□□□ -0.73
SMC3-202ENST00000462899 RTKN2Q8IZC4 609 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 DCBLD2Q96PD2 775 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
SMC3-202ENST00000462899 CCDC85CA6NKD9 419 aa10.47□□□□□ -0.73
SMC3-202ENST00000462899 RIOK3O14730 519 aaKnown RBP10.47□□□□□ -0.73
SMC3-202ENST00000462899 KCNQ3O43525 872 aa10.47□□□□□ -0.73
SMC3-202ENST00000462899 NBPF5PQ86XG9 351 aaPredicted RBP10.47□□□□□ -0.73
SMC3-202ENST00000462899 SYNE4Q8N205 404 aa10.47□□□□□ -0.73
SMC3-202ENST00000462899 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
SMC3-202ENST00000462899 ABT1Q9ULW3 272 aaKnown RBP10.47□□□□□ -0.73
SMC3-202ENST00000462899 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
SMC3-202ENST00000462899 ABCC12Q96J65 1359 aa10.47□□□□□ -0.73
SMC3-202ENST00000462899 MKI67P46013 3256 aaKnown RBP10.47□□□□□ -0.73
SMC3-202ENST00000462899 PRAMEF22A3QJZ6 481 aa10.46□□□□□ -0.73
SMC3-202ENST00000462899 HSPA5P11021 654 aaKnown RBP10.46□□□□□ -0.73
SMC3-202ENST00000462899 ECE1P42892 770 aa10.46□□□□□ -0.73
SMC3-202ENST00000462899 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
SMC3-202ENST00000462899 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
SMC3-202ENST00000462899 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
SMC3-202ENST00000462899 USP16Q9Y5T5 823 aa10.46□□□□□ -0.73
SMC3-202ENST00000462899 ANKRD36CQ5JPF3 1778 aa10.46□□□□□ -0.74
SMC3-202ENST00000462899 DLG5Q8TDM6 1919 aa10.46□□□□□ -0.74
SMC3-202ENST00000462899 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.74
SMC3-202ENST00000462899 AKAP11Q9UKA4 1901 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 GNAT3A8MTJ3 354 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 NBPF26B4DH59 902 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
SMC3-202ENST00000462899 AOC2O75106 756 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 MAP2K2P36507 400 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 EPS15P42566 896 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 PIP4K2AP48426 406 aaPredicted RBP10.45□□□□□ -0.74
SMC3-202ENST00000462899 TEFQ10587 303 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 NBPF10Q6P3W6 841 aaKnown RBP10.45□□□□□ -0.74
SMC3-202ENST00000462899 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 NBPF15Q8N660 670 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 HHIPL1Q96JK4 782 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 TSKSQ9UJT2 592 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 HTTP42858 3142 aa10.45□□□□□ -0.74
SMC3-202ENST00000462899 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 IBTKQ9P2D0 1353 aaPredicted RBP10.44□□□□□ -0.74
SMC3-202ENST00000462899 TRAF5O00463 557 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 NPHP1O15259 732 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 ALDH1B1P30837 517 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 PSEN1P49768 467 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 USP50Q70EL3 339 aaPredicted RBP10.44□□□□□ -0.74
SMC3-202ENST00000462899 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 TMEM106CQ9BVX2 250 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 KNSTRNQ9Y448 316 aa10.44□□□□□ -0.74
SMC3-202ENST00000462899 BRCA2P51587 3418 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 KIF7Q2M1P5 1343 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
SMC3-202ENST00000462899 CA12O43570 354 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 HOXA10P31260 410 aaPredicted RBP10.43□□□□□ -0.74
SMC3-202ENST00000462899 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
SMC3-202ENST00000462899 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMC3-202ENST00000462899 TPTE2Q6XPS3 522 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 PGAP2Q9UHJ9 254 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms