RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TUBGCP6Q96RT7 1819 aa17.77■□□□□ 0.44
HDAC6-213ENST00000462730 ANKRD36CQ5JPF3 1778 aa17.77■□□□□ 0.44
HDAC6-213ENST00000462730 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.43
HDAC6-213ENST00000462730 IL6STP40189 918 aaPredicted RBP17.77■□□□□ 0.43
HDAC6-213ENST00000462730 EPHA10Q5JZY3 1008 aa17.77■□□□□ 0.43
HDAC6-213ENST00000462730 ARXQ96QS3 562 aa17.77■□□□□ 0.43
HDAC6-213ENST00000462730 CWC25Q9NXE8 425 aaPredicted RBP17.77■□□□□ 0.43
HDAC6-213ENST00000462730 MYH14Q7Z406 1995 aaKnown RBP17.76■□□□□ 0.43
HDAC6-213ENST00000462730 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
HDAC6-213ENST00000462730 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
HDAC6-213ENST00000462730 CCDC87Q9NVE4 849 aa17.76■□□□□ 0.43
HDAC6-213ENST00000462730 COL15A1P39059 1388 aa17.76■□□□□ 0.43
HDAC6-213ENST00000462730 CASP7P55210 303 aa17.75■□□□□ 0.43
HDAC6-213ENST00000462730 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
HDAC6-213ENST00000462730 TCIRG1Q13488 830 aa17.75■□□□□ 0.43
HDAC6-213ENST00000462730 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
HDAC6-213ENST00000462730 NFKBIBQ15653 356 aa17.74■□□□□ 0.43
HDAC6-213ENST00000462730 UBE2Q2Q8WVN8 375 aa17.74■□□□□ 0.43
HDAC6-213ENST00000462730 ISCA1Q9BUE6 129 aa17.74■□□□□ 0.43
HDAC6-213ENST00000462730 NUP98P52948 1817 aa17.74■□□□□ 0.43
HDAC6-213ENST00000462730 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
HDAC6-213ENST00000462730 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.438e-6■□□□□ 9
HDAC6-213ENST00000462730 GIGYF2Q6Y7W6 1299 aaKnown RBP17.73■□□□□ 0.43
HDAC6-213ENST00000462730 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
HDAC6-213ENST00000462730 H7C1W4 665 aa17.73■□□□□ 0.43
HDAC6-213ENST00000462730 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
HDAC6-213ENST00000462730 HLFQ16534 295 aa17.73■□□□□ 0.43
HDAC6-213ENST00000462730 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
HDAC6-213ENST00000462730 TBC1D2Q9BYX2 928 aa17.73■□□□□ 0.43
HDAC6-213ENST00000462730 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
HDAC6-213ENST00000462730 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
HDAC6-213ENST00000462730 LY75O60449 1722 aa17.72■□□□□ 0.43
HDAC6-213ENST00000462730 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-213ENST00000462730 SIL1Q9H173 461 aa17.71■□□□□ 0.43
HDAC6-213ENST00000462730 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
HDAC6-213ENST00000462730 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
HDAC6-213ENST00000462730 IL27Q8NEV9 243 aa17.71■□□□□ 0.43
HDAC6-213ENST00000462730 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.43
HDAC6-213ENST00000462730 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
HDAC6-213ENST00000462730 EP400Q96L91 3159 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 KCNQ4P56696 695 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
HDAC6-213ENST00000462730 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 ERVV-1B6SEH8 477 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 ERC2O15083 957 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 SASH1O94885 1247 aa17.7■□□□□ 0.42
HDAC6-213ENST00000462730 BCORQ6W2J9 1755 aa17.69■□□□□ 0.42
HDAC6-213ENST00000462730 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
HDAC6-213ENST00000462730 GPTP24298 496 aa17.69■□□□□ 0.42
HDAC6-213ENST00000462730 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-213ENST00000462730 GSE1Q14687 1217 aa17.69■□□□□ 0.42
HDAC6-213ENST00000462730 AACSQ86V21 672 aa17.69■□□□□ 0.42
HDAC6-213ENST00000462730 TTC41PQ6P2S7 1318 aa17.69■□□□□ 0.42
HDAC6-213ENST00000462730 GPATCH3Q96I76 525 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 KIF2CQ99661 725 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 USP26Q9BXU7 913 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 REC8O95072 547 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 MAP4K4O95819 1239 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-213ENST00000462730 FOXO4P98177 505 aa17.68■□□□□ 0.42
HDAC6-213ENST00000462730 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-213ENST00000462730 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 CHMLP26374 656 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 LMBR1LQ6UX01 489 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
HDAC6-213ENST00000462730 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-213ENST00000462730 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 PTPN12Q05209 780 aaKnown RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 ESYT1Q9BSJ8 1104 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 CCNL1Q9UK58 526 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 CHMP3Q9Y3E7 222 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-213ENST00000462730 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
HDAC6-213ENST00000462730 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
HDAC6-213ENST00000462730 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
HDAC6-213ENST00000462730 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
HDAC6-213ENST00000462730 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-213ENST00000462730 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-213ENST00000462730 SCN7AQ01118 1682 aa17.65■□□□□ 0.42
HDAC6-213ENST00000462730 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
HDAC6-213ENST00000462730 SNX21Q969T3 373 aa17.64■□□□□ 0.41
HDAC6-213ENST00000462730 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-213ENST00000462730 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
HDAC6-213ENST00000462730 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
HDAC6-213ENST00000462730 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
HDAC6-213ENST00000462730 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-213ENST00000462730 TLR7Q9NYK1 1049 aaKnown RBP17.63■□□□□ 0.41
HDAC6-213ENST00000462730 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
HDAC6-213ENST00000462730 MYH3P11055 1940 aa17.63■□□□□ 0.41
HDAC6-213ENST00000462730 TFCP2Q12800 502 aa17.62■□□□□ 0.41
HDAC6-213ENST00000462730 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
HDAC6-213ENST00000462730 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms