RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 FAM196AQ6ZSG2 479 aa18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 EP400Q96L91 3159 aa18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 CNTNAP4Q9C0A0 1308 aa18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 ZBTB47Q9UFB7 747 aaPredicted RBP18.59■□□□□ 0.57
RPRD1B-203ENST00000462548 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.57
RPRD1B-203ENST00000462548 KLHDC4Q8TBB5 520 aa18.58■□□□□ 0.57
RPRD1B-203ENST00000462548 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
RPRD1B-203ENST00000462548 TAF1LQ8IZX4 1826 aa18.58■□□□□ 0.56
RPRD1B-203ENST00000462548 RFX5P48382 616 aaPredicted RBP18.58■□□□□ 0.56
RPRD1B-203ENST00000462548 UBN2Q6ZU65 1347 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 SALL3Q9BXA9 1300 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 HSP90AB3PQ58FF7 597 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 SYNE4Q8N205 404 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 TRIM37O94972 964 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 ZNF34Q8IZ26 560 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
RPRD1B-203ENST00000462548 PCCAP05165 728 aaPredicted RBP18.56■□□□□ 0.56
RPRD1B-203ENST00000462548 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
RPRD1B-203ENST00000462548 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
RPRD1B-203ENST00000462548 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 BCORQ6W2J9 1755 aa18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 SEC24BO95487 1268 aa18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 RXRBP28702 533 aa18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 RC3H1Q5TC82 1133 aaKnown RBP18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
RPRD1B-203ENST00000462548 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
RPRD1B-203ENST00000462548 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
RPRD1B-203ENST00000462548 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
RPRD1B-203ENST00000462548 PTPN12Q05209 780 aaKnown RBP18.54■□□□□ 0.56
RPRD1B-203ENST00000462548 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 SIL1Q9H173 461 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 RPS6KA4O75676 772 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 SASH1O94885 1247 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 PDE1AP54750 535 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 HSP90AB4PQ58FF6 505 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 C4BP0C0L5 1744 aa18.53■□□□□ 0.56
RPRD1B-203ENST00000462548 NUTM1Q86Y26 1132 aa18.52■□□□□ 0.56
RPRD1B-203ENST00000462548 COPRSQ9NQ92 184 aa18.52■□□□□ 0.56
RPRD1B-203ENST00000462548 GNPATO15228 680 aa18.52■□□□□ 0.55
RPRD1B-203ENST00000462548 SUSD4Q5VX71 490 aa18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 CDHR2Q9BYE9 1310 aa18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
RPRD1B-203ENST00000462548 G3BP1Q13283 466 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPRD1B-203ENST00000462548 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
RPRD1B-203ENST00000462548 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
RPRD1B-203ENST00000462548 MX1P20591 662 aa18.5■□□□□ 0.55
RPRD1B-203ENST00000462548 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
RPRD1B-203ENST00000462548 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
RPRD1B-203ENST00000462548 ERC1Q8IUD2 1116 aa18.49■□□□□ 0.55
RPRD1B-203ENST00000462548 STAP2Q9UGK3 403 aa18.49■□□□□ 0.55
RPRD1B-203ENST00000462548 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
RPRD1B-203ENST00000462548 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 CSF1RP07333 972 aa18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 CCDC85AQ96PX6 553 aaPredicted RBP18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 TUBGCP6Q96RT7 1819 aa18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 PROM2Q8N271 834 aa18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
RPRD1B-203ENST00000462548 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
RPRD1B-203ENST00000462548 ARHGEF1Q92888 912 aaKnown RBP18.47■□□□□ 0.55
RPRD1B-203ENST00000462548 NARFQ9UHQ1 456 aa18.47■□□□□ 0.55
RPRD1B-203ENST00000462548 SDSP20132 328 aa18.47■□□□□ 0.55
RPRD1B-203ENST00000462548 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
RPRD1B-203ENST00000462548 C4AP0C0L4 1744 aa18.46■□□□□ 0.55
RPRD1B-203ENST00000462548 NTSR2O95665 410 aa18.46■□□□□ 0.55
RPRD1B-203ENST00000462548 PARP10Q53GL7 1025 aa18.46■□□□□ 0.55
RPRD1B-203ENST00000462548 EAF2Q96CJ1 260 aaPredicted RBP18.46■□□□□ 0.55
RPRD1B-203ENST00000462548 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
RPRD1B-203ENST00000462548 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 CLASRPQ8N2M8 674 aaKnown RBP18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 TTLL11Q8NHH1 800 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 MYH3P11055 1940 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 PHF14O94880 888 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 TBC1D9BQ66K14 1250 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 AK7Q96M32 723 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
RPRD1B-203ENST00000462548 HCLS1P14317 486 aaPredicted RBP18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 CTSWP56202 376 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 TFCP2Q12800 502 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 TXNRD1Q16881 649 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 LRRC24Q50LG9 513 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 PI4K2BQ8TCG2 481 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 UBR3Q6ZT12 1888 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 DDX60Q8IY21 1712 aaKnown RBP18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 PDE8AO60658 829 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms