RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 PPP1R42Q7Z4L9 355 aa24.79■■□□□ 1.56
PTPN18-207ENST00000462321 SSH3Q8TE77 659 aa24.79■■□□□ 1.56
PTPN18-207ENST00000462321 BICC1Q9H694 974 aaKnown RBP24.79■■□□□ 1.56
PTPN18-207ENST00000462321 UBN2Q6ZU65 1347 aa24.79■■□□□ 1.56
PTPN18-207ENST00000462321 POLA2Q14181 598 aa24.78■■□□□ 1.56
PTPN18-207ENST00000462321 TRAPPC3LQ5T215 181 aa24.78■■□□□ 1.56
PTPN18-207ENST00000462321 ZBTB38Q8NAP3 1195 aaPredicted RBP24.78■■□□□ 1.56
PTPN18-207ENST00000462321 ARHGEF1Q92888 912 aaKnown RBP24.78■■□□□ 1.56
PTPN18-207ENST00000462321 SSFA2P28290 1259 aa24.78■■□□□ 1.56
PTPN18-207ENST00000462321 PARP10Q53GL7 1025 aa24.78■■□□□ 1.56
PTPN18-207ENST00000462321 SMIM5Q71RC9 77 aa24.78■■□□□ 1.56
PTPN18-207ENST00000462321 UBR3Q6ZT12 1888 aa24.77■■□□□ 1.56
PTPN18-207ENST00000462321 SRGAP3O43295 1099 aa24.77■■□□□ 1.56
PTPN18-207ENST00000462321 ZPR1O75312 459 aa24.77■■□□□ 1.56
PTPN18-207ENST00000462321 JARID2Q92833 1246 aaPredicted RBP24.77■■□□□ 1.56
PTPN18-207ENST00000462321 PHF14O94880 888 aa24.76■■□□□ 1.55
PTPN18-207ENST00000462321 RABL6Q3YEC7 729 aaPredicted RBP24.76■■□□□ 1.55
PTPN18-207ENST00000462321 PDZRN3Q9UPQ7 1066 aa24.76■■□□□ 1.55
PTPN18-207ENST00000462321 USP42Q9H9J4 1324 aaKnown RBP24.76■■□□□ 1.55
PTPN18-207ENST00000462321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.75■■□□□ 1.55
PTPN18-207ENST00000462321 C4AP0C0L4 1744 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 RFC4P35249 363 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 EPHA10Q5JZY3 1008 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 USPL1Q5W0Q7 1092 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 CDHR2Q9BYE9 1310 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 NUCB1Q02818 461 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 BCL2L12Q9HB09 334 aa24.75■■□□□ 1.55
PTPN18-207ENST00000462321 SRP68Q9UHB9 627 aaKnown RBP24.75■■□□□ 1.55
PTPN18-207ENST00000462321 NIP7Q9Y221 180 aaKnown RBP eCLIP24.75■■□□□ 1.55
PTPN18-207ENST00000462321 SF3B2Q13435 895 aaKnown RBP24.74■■□□□ 1.55
PTPN18-207ENST00000462321 AKT1S1Q96B36 256 aa24.74■■□□□ 1.55
PTPN18-207ENST00000462321 CAMKK2Q96RR4 588 aa24.74■■□□□ 1.55
PTPN18-207ENST00000462321 RTL5Q5HYW3 569 aaPredicted RBP24.73■■□□□ 1.55
PTPN18-207ENST00000462321 FAM89AQ96GI7 184 aa24.73■■□□□ 1.55
PTPN18-207ENST00000462321 PLA2G12BQ9BX93 195 aa24.73■■□□□ 1.55
PTPN18-207ENST00000462321 TRMT112Q9UI30 125 aaKnown RBP24.73■■□□□ 1.55
PTPN18-207ENST00000462321 FOXO4P98177 505 aa24.72■■□□□ 1.55
PTPN18-207ENST00000462321 ZNF827Q17R98 1081 aa24.72■■□□□ 1.55
PTPN18-207ENST00000462321 SUSD4Q5VX71 490 aa24.72■■□□□ 1.55
PTPN18-207ENST00000462321 BAG6P46379 1132 aa24.71■■□□□ 1.55
PTPN18-207ENST00000462321 EN1Q05925 392 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-207ENST00000462321 UTP14AQ9BVJ6 771 aaKnown RBP24.71■■□□□ 1.55
PTPN18-207ENST00000462321 ANKRD45Q5TZF3 282 aa24.7■■□□□ 1.54
PTPN18-207ENST00000462321 CHD1LQ86WJ1 897 aa24.7■■□□□ 1.54
PTPN18-207ENST00000462321 SKAP1Q86WV1 359 aa24.7■■□□□ 1.54
PTPN18-207ENST00000462321 EZH2Q15910 746 aaKnown RBP24.69■■□□□ 1.54
PTPN18-207ENST00000462321 TBC1D9BQ66K14 1250 aa24.69■■□□□ 1.54
PTPN18-207ENST00000462321 TFCP2L1Q9NZI6 479 aa24.69■■□□□ 1.54
PTPN18-207ENST00000462321 EXOC6BQ9Y2D4 811 aa24.69■■□□□ 1.54
PTPN18-207ENST00000462321 SH3TC1Q8TE82 1336 aa24.69■■□□□ 1.54
PTPN18-207ENST00000462321 NTSR2O95665 410 aa24.69■■□□□ 1.54
PTPN18-207ENST00000462321 IRS4O14654 1257 aaPredicted RBP24.68■■□□□ 1.54
PTPN18-207ENST00000462321 LMBR1LQ6UX01 489 aa24.68■■□□□ 1.54
PTPN18-207ENST00000462321 NOP58Q9Y2X3 529 aaKnown RBP24.68■■□□□ 1.54
PTPN18-207ENST00000462321 HSP90AB4PQ58FF6 505 aa24.67■■□□□ 1.54
PTPN18-207ENST00000462321 COL24A1Q17RW2 1714 aa24.67■■□□□ 1.54
PTPN18-207ENST00000462321 SURF6O75683 361 aaKnown RBP24.66■■□□□ 1.54
PTPN18-207ENST00000462321 CCDC125Q86Z20 511 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 SYNE4Q8N205 404 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 FLAD1Q8NFF5 587 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 LNPKQ9C0E8 428 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 RAB11FIP3O75154 756 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 HSP90B1P14625 803 aaKnown RBP24.66■■□□□ 1.54
PTPN18-207ENST00000462321 RGS3P49796 1198 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 SETDB2Q96T68 719 aa24.66■■□□□ 1.54
PTPN18-207ENST00000462321 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
PTPN18-207ENST00000462321 RFX5P48382 616 aaPredicted RBP24.65■■□□□ 1.54
PTPN18-207ENST00000462321 BICDL1Q6ZP65 573 aa24.65■■□□□ 1.54
PTPN18-207ENST00000462321 FAM177BA6PVY3 158 aa24.64■■□□□ 1.54
PTPN18-207ENST00000462321 PDE8AO60658 829 aa24.64■■□□□ 1.54
PTPN18-207ENST00000462321 GYS1P13807 737 aa24.64■■□□□ 1.54
PTPN18-207ENST00000462321 CSF1RP07333 972 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 PDE4AP27815 886 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 CTSWP56202 376 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 LRRCC1Q9C099 1032 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 NYXQ9GZU5 481 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 COPRSQ9NQ92 184 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 CHMP3Q9Y3E7 222 aa24.64■■□□□ 1.53
PTPN18-207ENST00000462321 PA2G4Q9UQ80 394 aaKnown RBP24.63■■□□□ 1.53
PTPN18-207ENST00000462321 CARMIL3Q8ND23 1372 aa24.63■■□□□ 1.53
PTPN18-207ENST00000462321 APBB1O00213 710 aa24.62■■□□□ 1.53
PTPN18-207ENST00000462321 DEFB132Q7Z7B7 95 aa24.62■■□□□ 1.53
PTPN18-207ENST00000462321 TUBGCP6Q96RT7 1819 aa24.62■■□□□ 1.53
PTPN18-207ENST00000462321 PTPN12Q05209 780 aaKnown RBP24.61■■□□□ 1.53
PTPN18-207ENST00000462321 KIF1BPQ96EK5 621 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 LAMB2P55268 1798 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 NFIXQ14938 502 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 NBPF5PQ86XG9 351 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-207ENST00000462321 COL23A1Q86Y22 540 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-207ENST00000462321 NUTM1Q86Y26 1132 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 ERC1Q8IUD2 1116 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 TTLL11Q8NHH1 800 aa24.61■■□□□ 1.53
PTPN18-207ENST00000462321 ANO8Q9HCE9 1232 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-207ENST00000462321 PNPLA7Q6ZV29 1317 aa24.6■■□□□ 1.53
PTPN18-207ENST00000462321 OS9Q13438 667 aaPredicted RBP24.6■■□□□ 1.53
PTPN18-207ENST00000462321 SLC15A2Q16348 729 aa24.6■■□□□ 1.53
PTPN18-207ENST00000462321 STK32BQ9NY57 414 aa24.6■■□□□ 1.53
PTPN18-207ENST00000462321 HCLS1P14317 486 aaPredicted RBP24.59■■□□□ 1.53
PTPN18-207ENST00000462321 G3BP1Q13283 466 aaKnown RBP eCLIP24.59■■□□□ 1.53
PTPN18-207ENST00000462321 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms