RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 TAF7LQ5H9L4 462 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 DLG5Q8TDM6 1919 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 COG3Q96JB2 828 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 FHOD1Q9Y613 1164 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 NEXMIFQ5QGS0 1516 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 FOXO3O43524 673 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 COL9A3Q14050 684 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ZSCAN31Q96LW9 406 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 FMNL2Q96PY5 1086 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ZKSCAN1P17029 563 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ST5P78524 1137 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 UBXN4Q92575 508 aa9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-204ENST00000462279 ABCC3O15438 1527 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 ERBB3P21860 1342 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 FLIIQ13045 1269 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 CCDC34Q96HJ3 373 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 TRIM66O15016 1216 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 NEMFO60524 1076 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 PDCP20941 246 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 CCZ1BP86790 482 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 CCZ1P86791 482 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-204ENST00000462279 SLC20A2Q08357 652 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 FAM177A1Q8N128 213 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-204ENST00000462279 PGBD1Q96JS3 809 aa9.48□□□□□ -0.89
ERCC8-204ENST00000462279 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 GYS2P54840 703 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 IDI1Q13907 227 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 MNS1Q8NEH6 495 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 TSPYL1Q9H0U9 437 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 EPC1Q9H2F5 836 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 H3BQV1 296 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 SMC2O95347 1197 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
ERCC8-204ENST00000462279 SLFNL1Q499Z3 407 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 AOPEPQ8N6M6 819 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 PI4K2BQ8TCG2 481 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 ARGLU1Q9NWB6 273 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-204ENST00000462279 TPM4P67936 248 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 DNAI1Q9UI46 699 aa9.47□□□□□ -0.89
ERCC8-204ENST00000462279 ELP1O95163 1332 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.89
ERCC8-204ENST00000462279 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.89
ERCC8-204ENST00000462279 IQCB1Q15051 598 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 SMARCE1Q969G3 411 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 RASSF4Q9H2L5 321 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 KIF13AQ9H1H9 1805 aa9.46□□□□□ -0.89
ERCC8-204ENST00000462279 URI1O94763 535 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-204ENST00000462279 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 RUFY2Q8WXA3 655 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 CHMP4CQ96CF2 233 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 JAK2O60674 1132 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 TMC6Q7Z403 805 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 FTOQ9C0B1 505 aaKnown RBP eCLIP9.46□□□□□ -0.9
ERCC8-204ENST00000462279 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
ERCC8-204ENST00000462279 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.46□□□□□ -0.9
ERCC8-204ENST00000462279 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 CDC25BP30305 580 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 GPS2Q13227 327 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 ZRSR1Q15695 479 aaKnown RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 STX1AQ16623 288 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 ZSCAN26Q16670 478 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 USP44Q9H0E7 712 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 RBM8AQ9Y5S9 174 aaKnown RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 KIF2AO00139 706 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-204ENST00000462279 TXLNBQ8N3L3 684 aa9.45□□□□□ -0.9
ERCC8-204ENST00000462279 KINO60870 393 aaKnown RBP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 SFPQP23246 707 aaKnown RBP eCLIP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 OAS2P29728 719 aaKnown RBP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 LMAN1P49257 510 aa9.44□□□□□ -0.9
ERCC8-204ENST00000462279 BLOC1S2Q6QNY1 142 aa9.44□□□□□ -0.9
ERCC8-204ENST00000462279 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
ERCC8-204ENST00000462279 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 CREB3L3Q68CJ9 461 aa9.44□□□□□ -0.9
ERCC8-204ENST00000462279 CCDC73Q6ZRK6 1079 aa9.44□□□□□ -0.9
ERCC8-204ENST00000462279 CCAR1Q8IX12 1150 aaKnown RBP9.44□□□□□ -0.9
ERCC8-204ENST00000462279 BRF1Q92994 677 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms