RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 TIAM2Q8IVF5 1701 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 NUDT7P0C024 238 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 TM4SF1P30408 202 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 CAMK2BQ13554 666 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 DGKZQ13574 1117 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 SLC12A5Q9H2X9 1139 aa8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 SRP68Q9UHB9 627 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 ABT1Q9ULW3 272 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-204ENST00000462198 EIF5BO60841 1220 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 GPR101Q96P66 508 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 IRX2Q9BZI1 471 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 TAF1DQ9H5J8 278 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
SMARCC1-204ENST00000462198 ST20-MTHFSA0A0A6YYL1 179 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 IQCA1LA6NCM1 817 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 TK2O00142 265 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 POLRMTO00411 1230 aaKnown RBP8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 PDE4AP27815 886 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 GRM1Q13255 1194 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 EAPPQ56P03 285 aaPredicted RBP8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 DIEXFQ68CQ4 756 aaKnown RBP8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 MYH14Q7Z406 1995 aaKnown RBP8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 CNTROBQ8N137 903 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 COG3Q96JB2 828 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 CAPNS2Q96L46 248 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 KDM4CQ9H3R0 1056 aa8.16□□□□□ -1.1
SMARCC1-204ENST00000462198 CNTNAP4Q9C0A0 1308 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 HRO43593 1189 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 ECE1P42892 770 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 SOX10P56693 466 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 RRS1Q15050 365 aaKnown RBP8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 C2CD5Q86YS7 1000 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 TERF2IPQ9NYB0 399 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 SPG7Q9UQ90 795 aa8.15□□□□□ -1.1
SMARCC1-204ENST00000462198 SCN4AP35499 1836 aa8.15□□□□□ -1.11
SMARCC1-204ENST00000462198 EDC4Q6P2E9 1401 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 H0YIN7 160 aa8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 HSP90AB2PQ58FF8 381 aa8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 CYP4F22Q6NT55 531 aa8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 DDX27Q96GQ7 796 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-204ENST00000462198 USP42Q9H9J4 1324 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-204ENST00000462198 C21orf2O43822 256 aa8.13□□□□□ -1.11
SMARCC1-204ENST00000462198 HSPA5P11021 654 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-204ENST00000462198 MAP2K2P36507 400 aa8.13□□□□□ -1.11
SMARCC1-204ENST00000462198 AFDNP55196 1824 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-204ENST00000462198 TRIM66O15016 1216 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 CA12O43570 354 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 AOC2O75106 756 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 ZPR1O75312 459 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 RBM26Q5T8P6 1007 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 ZNF622Q969S3 477 aaKnown RBP eCLIP8.12□□□□□ -1.116e-18■■□□□ 13.1
SMARCC1-204ENST00000462198 GCC1Q96CN9 775 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 TESK2Q96S53 571 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 DDX21Q9NR30 783 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 FER1L6Q2WGJ9 1857 aa8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-204ENST00000462198 KDRP35968 1356 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 SERPINB2P05120 415 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 PHKG2P15735 406 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 EPHX2P34913 555 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 PDE4DQ08499 809 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 NFIXQ14938 502 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-204ENST00000462198 DLEC1Q9Y238 1755 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 HABP4Q5JVS0 413 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 RTL1A6NKG5 1358 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 INSRP06213 1382 aa8.1□□□□□ -1.11
SMARCC1-204ENST00000462198 ERVV-2B6SEH9 535 aa8.09□□□□□ -1.11
SMARCC1-204ENST00000462198 PTCD1O75127 700 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-204ENST00000462198 CST9Q5W186 159 aa8.09□□□□□ -1.11
SMARCC1-204ENST00000462198 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-204ENST00000462198 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-204ENST00000462198 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
SMARCC1-204ENST00000462198 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-204ENST00000462198 PUS7Q96PZ0 661 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-204ENST00000462198 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms