RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 AACSQ86V21 672 aa21.95■■□□□ 1.1
HPS3-204ENST00000462030 GOLGA6L6A8MZA4 724 aa21.95■■□□□ 1.1
HPS3-204ENST00000462030 NMIQ13287 307 aaPredicted RBP21.95■■□□□ 1.1
HPS3-204ENST00000462030 CKAP2LQ8IYA6 745 aa21.95■■□□□ 1.1
HPS3-204ENST00000462030 GPATCH3Q96I76 525 aa21.95■■□□□ 1.1
HPS3-204ENST00000462030 CBX1P83916 185 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 ATP2B3Q16720 1220 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 SLC27A2O14975 620 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 HOXB7P09629 217 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 MAP4K1Q92918 833 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 TAF6LQ9Y6J9 622 aa21.94■■□□□ 1.1
HPS3-204ENST00000462030 SETD1BQ9UPS6 1966 aaKnown RBP21.93■■□□□ 1.1
HPS3-204ENST00000462030 ELP1O95163 1332 aa21.93■■□□□ 1.1
HPS3-204ENST00000462030 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
HPS3-204ENST00000462030 CHAF1AQ13111 956 aaPredicted RBP21.92■■□□□ 1.1
HPS3-204ENST00000462030 DACT1Q9NYF0 836 aa21.92■■□□□ 1.1
HPS3-204ENST00000462030 MAP3K2Q9Y2U5 619 aa21.92■■□□□ 1.1
HPS3-204ENST00000462030 ZSCAN20P17040 1043 aaPredicted RBP21.92■■□□□ 1.1
HPS3-204ENST00000462030 CWF19L2Q2TBE0 894 aaKnown RBP21.91■■□□□ 1.1
HPS3-204ENST00000462030 ANO6Q4KMQ2 910 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 CBX8Q9HC52 389 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 TFIP11Q9UBB9 837 aaKnown RBP21.91■■□□□ 1.1
HPS3-204ENST00000462030 LTN1O94822 1766 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 A0A0D9SFI3 127 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 PROSER3Q2NL68 480 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 TNMDQ9H2S6 317 aa21.91■■□□□ 1.1
HPS3-204ENST00000462030 NBPF6Q5VWK0 638 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 ERC1Q8IUD2 1116 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 NBPF4Q96M43 638 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 CCDC8Q9H0W5 538 aaPredicted RBP21.9■■□□□ 1.1
HPS3-204ENST00000462030 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 LRMPQ12912 555 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 LARP1Q6PKG0 1096 aaKnown RBP21.9■■□□□ 1.1
HPS3-204ENST00000462030 CCDC186Q7Z3E2 898 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 EAF2Q96CJ1 260 aaPredicted RBP21.9■■□□□ 1.1
HPS3-204ENST00000462030 TLR7Q9NYK1 1049 aaKnown RBP21.9■■□□□ 1.1
HPS3-204ENST00000462030 NPHP4O75161 1426 aaPredicted RBP21.9■■□□□ 1.1
HPS3-204ENST00000462030 USP54Q70EL1 1684 aa21.9■■□□□ 1.1
HPS3-204ENST00000462030 SASH1O94885 1247 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 DMTNQ08495 405 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 BLOC1S2Q6QNY1 142 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 PDCL2Q8N4E4 241 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 NRBP1Q9UHY1 535 aa21.89■■□□□ 1.1
HPS3-204ENST00000462030 PDCP20941 246 aa21.89■■□□□ 1.09
HPS3-204ENST00000462030 PSMA5P28066 241 aa21.89■■□□□ 1.09
HPS3-204ENST00000462030 STK3Q13188 491 aa21.89■■□□□ 1.09
HPS3-204ENST00000462030 SPATA32Q96LK8 384 aa21.89■■□□□ 1.09
HPS3-204ENST00000462030 ZHX1Q9UKY1 873 aaPredicted RBP21.89■■□□□ 1.09
HPS3-204ENST00000462030 EID1Q9Y6B2 187 aa21.89■■□□□ 1.09
HPS3-204ENST00000462030 TOB2Q14106 344 aaPredicted RBP21.88■■□□□ 1.09
HPS3-204ENST00000462030 TEFQ10587 303 aa21.88■■□□□ 1.09
HPS3-204ENST00000462030 ANKRD7Q92527 254 aa21.88■■□□□ 1.09
HPS3-204ENST00000462030 DBF4Q9UBU7 674 aaPredicted RBP21.88■■□□□ 1.09
HPS3-204ENST00000462030 GOLGA6L4A6NEF3 574 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 CTIFO43310 598 aaKnown RBP21.87■■□□□ 1.09
HPS3-204ENST00000462030 ALDH1L1O75891 902 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 RPS6KB1P23443 525 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 MPRIPQ6WCQ1 1025 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 LEO1Q8WVC0 666 aaPredicted RBP21.87■■□□□ 1.09
HPS3-204ENST00000462030 BOLA2Q9H3K6 86 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 CEBPAP49715 358 aaPredicted RBP21.87■■□□□ 1.09
HPS3-204ENST00000462030 KAZALD1Q96I82 304 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 SUCLG2Q96I99 432 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 SCAND2PQ9GZW5 306 aaPredicted RBP21.87■■□□□ 1.09
HPS3-204ENST00000462030 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
HPS3-204ENST00000462030 SPDYE4A6NLX3 237 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 HIP1O00291 1037 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 DRC7Q8IY82 874 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 FSD1Q9BTV5 496 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 SNRKQ9NRH2 765 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 NPHP3Q7Z494 1330 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 ZNF589Q86UQ0 364 aaPredicted RBP21.86■■□□□ 1.09
HPS3-204ENST00000462030 CLSTN2Q9H4D0 955 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
HPS3-204ENST00000462030 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 NR1I2O75469 434 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 ZNF75DP51815 510 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 KSR2Q6VAB6 950 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 RBM43Q6ZSC3 357 aaKnown RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 TRIM5Q9C035 493 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 DDX19AQ9NUU7 478 aaKnown RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 MED23Q9ULK4 1368 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 ADGRL3Q9HAR2 1447 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 ANKRD1Q15327 319 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 UTP14CQ5TAP6 766 aaKnown RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 PLA2G4DQ86XP0 818 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 PGBD1Q96JS3 809 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 C16orf45Q96MC5 204 aaPredicted RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 CHMP4AQ9BY43 222 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 BICC1Q9H694 974 aaKnown RBP21.85■■□□□ 1.09
HPS3-204ENST00000462030 LMO7Q8WWI1 1683 aa21.85■■□□□ 1.09
HPS3-204ENST00000462030 ANKARQ7Z5J8 1434 aa21.84■■□□□ 1.09
HPS3-204ENST00000462030 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
HPS3-204ENST00000462030 U2AF2P26368 475 aaKnown RBP eCLIP21.84■■□□□ 1.09
HPS3-204ENST00000462030 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
HPS3-204ENST00000462030 SIL1Q9H173 461 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms