RNA–Protein interactions for RNA: ENST00000461280.1

KCNH2-204, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 1 (best)

Gene KCNH2, Length 2,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-204ENST00000461280 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
KCNH2-204ENST00000461280 R3HCC1Q9Y3T6 440 aaKnown RBP23.18■■□□□ 1.3
KCNH2-204ENST00000461280 KCNJ4P48050 445 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 TPCN1Q9ULQ1 816 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 HDAC5Q9UQL6 1122 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 TAF6LQ9Y6J9 622 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 HSP90AA2PQ14568 343 aaPredicted RBP23.17■■□□□ 1.3
KCNH2-204ENST00000461280 EPHA10Q5JZY3 1008 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 MPNDQ8N594 471 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 MAP4K1Q92918 833 aa23.17■■□□□ 1.3
KCNH2-204ENST00000461280 ZC3H6P61129 1189 aaKnown RBP23.16■■□□□ 1.3
KCNH2-204ENST00000461280 TCEANC2Q96MN5 208 aa23.16■■□□□ 1.3
KCNH2-204ENST00000461280 SLC27A2O14975 620 aa23.16■■□□□ 1.3
KCNH2-204ENST00000461280 ZKSCAN1P17029 563 aaPredicted RBP23.16■■□□□ 1.3
KCNH2-204ENST00000461280 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
KCNH2-204ENST00000461280 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
KCNH2-204ENST00000461280 SH2B1Q9NRF2 756 aaPredicted RBP23.16■■□□□ 1.3
KCNH2-204ENST00000461280 VPS37CA5D8V6 355 aaPredicted RBP23.15■■□□□ 1.3
KCNH2-204ENST00000461280 HCLS1P14317 486 aaPredicted RBP23.15■■□□□ 1.3
KCNH2-204ENST00000461280 ZSCAN31Q96LW9 406 aaPredicted RBP23.15■■□□□ 1.3
KCNH2-204ENST00000461280 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.3
KCNH2-204ENST00000461280 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.3
KCNH2-204ENST00000461280 EDC3Q96F86 508 aaKnown RBP23.14■■□□□ 1.3
KCNH2-204ENST00000461280 FSD1Q9BTV5 496 aa23.14■■□□□ 1.3
KCNH2-204ENST00000461280 USP25Q9UHP3 1055 aa23.14■■□□□ 1.3
KCNH2-204ENST00000461280 ERBB3P21860 1342 aa23.14■■□□□ 1.3
KCNH2-204ENST00000461280 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
KCNH2-204ENST00000461280 RGPD5Q99666 1765 aa23.14■■□□□ 1.29
KCNH2-204ENST00000461280 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.29
KCNH2-204ENST00000461280 PTMAP06454 111 aaKnown RBP23.14■■□□□ 1.29
KCNH2-204ENST00000461280 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
KCNH2-204ENST00000461280 UBE2Q2Q8WVN8 375 aa23.14■■□□□ 1.29
KCNH2-204ENST00000461280 MYD88Q99836 296 aa23.13■■□□□ 1.29
KCNH2-204ENST00000461280 ATP6V1DQ9Y5K8 247 aa23.13■■□□□ 1.29
KCNH2-204ENST00000461280 MCM5P33992 734 aa23.13■■□□□ 1.29
KCNH2-204ENST00000461280 ZNF589Q86UQ0 364 aaPredicted RBP23.13■■□□□ 1.29
KCNH2-204ENST00000461280 RRP9O43818 475 aaKnown RBP23.12■■□□□ 1.29
KCNH2-204ENST00000461280 GIMAP6Q6P9H5 292 aa23.12■■□□□ 1.29
KCNH2-204ENST00000461280 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
KCNH2-204ENST00000461280 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
KCNH2-204ENST00000461280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.12■■□□□ 1.293e-10■■□□□ 12.9
KCNH2-204ENST00000461280 KDM6AO15550 1401 aaPredicted RBP23.12■■□□□ 1.29
KCNH2-204ENST00000461280 C5P01031 1676 aa23.12■■□□□ 1.29
KCNH2-204ENST00000461280 GCKRQ14397 625 aa23.12■■□□□ 1.29
KCNH2-204ENST00000461280 LARP1Q6PKG0 1096 aaKnown RBP23.12■■□□□ 1.29
KCNH2-204ENST00000461280 HIP1O00291 1037 aa23.11■■□□□ 1.29
KCNH2-204ENST00000461280 FAM184AQ8NB25 1140 aa23.11■■□□□ 1.29
KCNH2-204ENST00000461280 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
KCNH2-204ENST00000461280 SNRKQ9NRH2 765 aa23.11■■□□□ 1.29
KCNH2-204ENST00000461280 NPHP4O75161 1426 aaPredicted RBP23.11■■□□□ 1.29
KCNH2-204ENST00000461280 ADAMTS7Q9UKP4 1686 aa23.11■■□□□ 1.29
KCNH2-204ENST00000461280 MED23Q9ULK4 1368 aa23.1■■□□□ 1.29
KCNH2-204ENST00000461280 TRPM3Q9HCF6 1732 aaPredicted RBP23.1■■□□□ 1.29
KCNH2-204ENST00000461280 UVSSAQ2YD98 709 aa23.1■■□□□ 1.29
KCNH2-204ENST00000461280 ZNF496Q96IT1 587 aaPredicted RBP23.1■■□□□ 1.29
KCNH2-204ENST00000461280 NLRP2Q9NX02 1062 aa23.1■■□□□ 1.29
KCNH2-204ENST00000461280 NDUFB9Q9Y6M9 179 aa23.1■■□□□ 1.29
KCNH2-204ENST00000461280 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
KCNH2-204ENST00000461280 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 FAM173BQ6P4H8 233 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 CDC37L1Q7L3B6 337 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 FERMT3Q86UX7 667 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 ZNF830Q96NB3 372 aaPredicted RBP23.09■■□□□ 1.29
KCNH2-204ENST00000461280 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 FUCA2Q9BTY2 467 aa23.09■■□□□ 1.29
KCNH2-204ENST00000461280 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
KCNH2-204ENST00000461280 LETM1O95202 739 aaPredicted RBP23.08■■□□□ 1.29
KCNH2-204ENST00000461280 ADCY5O95622 1261 aa23.08■■□□□ 1.29
KCNH2-204ENST00000461280 CHGBP05060 677 aa23.08■■□□□ 1.29
KCNH2-204ENST00000461280 LARP1BQ659C4 914 aaKnown RBP23.08■■□□□ 1.29
KCNH2-204ENST00000461280 USP16Q9Y5T5 823 aa23.08■■□□□ 1.29
KCNH2-204ENST00000461280 ZNF142P52746 1687 aaPredicted RBP23.08■■□□□ 1.28
KCNH2-204ENST00000461280 PSMA5P28066 241 aa23.08■■□□□ 1.28
KCNH2-204ENST00000461280 BLOC1S2Q6QNY1 142 aa23.08■■□□□ 1.28
KCNH2-204ENST00000461280 PHKG2P15735 406 aa23.07■■□□□ 1.28
KCNH2-204ENST00000461280 RPS6KB1P23443 525 aa23.07■■□□□ 1.28
KCNH2-204ENST00000461280 TOB2Q14106 344 aaPredicted RBP23.07■■□□□ 1.28
KCNH2-204ENST00000461280 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
KCNH2-204ENST00000461280 DBNLQ9UJU6 430 aaKnown RBP23.07■■□□□ 1.28
KCNH2-204ENST00000461280 COL15A1P39059 1388 aa23.07■■□□□ 1.28
KCNH2-204ENST00000461280 MRC1P22897 1456 aa23.06■■□□□ 1.28
KCNH2-204ENST00000461280 TERF1P54274 439 aa23.06■■□□□ 1.28
KCNH2-204ENST00000461280 TTC6Q86TZ1 520 aa23.06■■□□□ 1.28
KCNH2-204ENST00000461280 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
KCNH2-204ENST00000461280 RFX5P48382 616 aaPredicted RBP23.05■■□□□ 1.28
KCNH2-204ENST00000461280 TFCP2Q12800 502 aa23.05■■□□□ 1.28
KCNH2-204ENST00000461280 STK3Q13188 491 aa23.05■■□□□ 1.28
KCNH2-204ENST00000461280 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
KCNH2-204ENST00000461280 MEGF6O75095 1541 aa23.05■■□□□ 1.28
KCNH2-204ENST00000461280 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
KCNH2-204ENST00000461280 TAF5LO75529 589 aa23.04■■□□□ 1.28
KCNH2-204ENST00000461280 PTPN12Q05209 780 aaKnown RBP23.04■■□□□ 1.28
KCNH2-204ENST00000461280 RNF20Q5VTR2 975 aa23.04■■□□□ 1.28
KCNH2-204ENST00000461280 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
KCNH2-204ENST00000461280 CHMP3Q9Y3E7 222 aa23.04■■□□□ 1.28
KCNH2-204ENST00000461280 JCADQ9P266 1359 aa23.04■■□□□ 1.28
KCNH2-204ENST00000461280 RBM10P98175 930 aaKnown RBP23.03■■□□□ 1.28
KCNH2-204ENST00000461280 UBE3BQ7Z3V4 1068 aa23.03■■□□□ 1.28
KCNH2-204ENST00000461280 COPRSQ9NQ92 184 aa23.03■■□□□ 1.28
KCNH2-204ENST00000461280 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms