RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PDE4BQ07343 736 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 KRT222Q8N1A0 295 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 ARL1P40616 181 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-205ENST00000461221 SPAG1Q07617 926 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-205ENST00000461221 DUSP27Q5VZP5 1158 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 KAT14Q9H8E8 782 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CABP5Q9NP86 173 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TMOD3Q9NYL9 352 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 ABCC11Q96J66 1382 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 LMBR1Q8WVP7 490 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 EVI5LQ96CN4 794 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 MYD88Q99836 296 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 N4BP3O15049 544 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC129Q6ZRS4 1044 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 KRT13P13646 458 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 TPD52P55327 224 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-205ENST00000461221 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 ATP2C2O75185 946 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 GTF2A1P52655 376 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-205ENST00000461221 TUBB4BP68371 445 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 APBB1IPQ7Z5R6 666 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-205ENST00000461221 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
BRCA1-205ENST00000461221 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
BRCA1-205ENST00000461221 GJB2P29033 226 aa10.27□□□□□ -0.76
BRCA1-205ENST00000461221 PAIP2Q9BPZ3 127 aaKnown RBP10.27□□□□□ -0.76
BRCA1-205ENST00000461221 HMG20BQ9P0W2 317 aa10.27□□□□□ -0.76
BRCA1-205ENST00000461221 HLA-DOAP06340 250 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 ZNF165P49910 485 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 SAMM50Q9Y512 469 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 DHX29Q7Z478 1369 aaKnown RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 BIN1O00499 593 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 NBPF1Q3BBV0 1214 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 ARFGAP3Q9NP61 516 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 CEP83Q9Y592 693 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 USP16Q9Y5T5 823 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 PLEKHH2Q8IVE3 1493 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 TACC1O75410 805 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 BAG3O95817 575 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 TMPOP42166 694 aaKnown RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 PSMC4P43686 418 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 UBE2HP62256 183 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 ZBTB16Q05516 673 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC121Q6ZUS5 278 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 OTUD6BQ8N6M0 293 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 SRRTQ9BXP5 876 aaKnown RBP10.27□□□□□ -0.77
BRCA1-205ENST00000461221 SSFA2P28290 1259 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 AMOTQ4VCS5 1084 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 SLC52A1Q9NWF4 448 aa10.27□□□□□ -0.77
BRCA1-205ENST00000461221 ALDH3A1P30838 453 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 HYPKQ9NX55 129 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 METAP2P50579 478 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC63Q8NA47 563 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 WDR66Q8TBY9 1149 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
BRCA1-205ENST00000461221 TNPO1Q92973 898 aaKnown RBP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 ORC3Q9UBD5 711 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-205ENST00000461221 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 ATRIPQ8WXE1 791 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 ATP2A2P16615 1042 aaKnown RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 RRAGBQ5VZM2 374 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 GTPBP4Q9BZE4 634 aaKnown RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 LRRC9Q6ZRR7 1453 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 TSPY2A6NKD2 308 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 PHACTR2O75167 634 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 RRS1Q15050 365 aaKnown RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 TAF7Q15545 349 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC14Q49A88 953 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 MFSD6Q6ZSS7 791 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 RGS22Q8NE09 1264 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 STIM2Q9P246 746 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 TRMT112Q9UI30 125 aaKnown RBP10.25□□□□□ -0.77
BRCA1-205ENST00000461221 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 UBASH3AP57075 661 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 PIP4K2BP78356 416 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 GSTO1P78417 241 aa10.25□□□□□ -0.77
BRCA1-205ENST00000461221 ANKLE2Q86XL3 938 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 RPUSD2Q8IZ73 545 aaKnown RBP10.24□□□□□ -0.77
BRCA1-205ENST00000461221 MSANTD4Q8NCY6 345 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 IMPG2Q9BZV3 1241 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 RSPH14Q9UHP6 348 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 DAPK1P53355 1430 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 GMNNO75496 209 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 KRT83P78385 493 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 GSTA5Q7RTV2 222 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms