RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 PKNOX2Q96KN3 472 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 WDR17Q8IZU2 1322 aa11.87□□□□□ -0.51
DHFR2-203ENST00000461173 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
DHFR2-203ENST00000461173 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
DHFR2-203ENST00000461173 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
DHFR2-203ENST00000461173 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
DHFR2-203ENST00000461173 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
DHFR2-203ENST00000461173 CABP4P57796 275 aa11.87□□□□□ -0.51
DHFR2-203ENST00000461173 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
DHFR2-203ENST00000461173 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
DHFR2-203ENST00000461173 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 ATP5JP18859 108 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 PSMA5P28066 241 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 CLCN1P35523 988 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 ANP32BQ92688 251 aaKnown RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 MYD88Q99836 296 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 UBR2Q8IWV8 1755 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 AK2P54819 239 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 CASP7P55210 303 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 CYP46A1Q9Y6A2 500 aa11.86□□□□□ -0.51
DHFR2-203ENST00000461173 RPAP1Q9BWH6 1393 aaPredicted RBP11.86□□□□□ -0.51
DHFR2-203ENST00000461173 ARFGEF2Q9Y6D5 1785 aa11.85□□□□□ -0.51
DHFR2-203ENST00000461173 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
DHFR2-203ENST00000461173 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
DHFR2-203ENST00000461173 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
DHFR2-203ENST00000461173 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
DHFR2-203ENST00000461173 H7C1W4 665 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 MYL6BP14649 208 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 PTH1RQ03431 593 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 LRSAM1Q6UWE0 723 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
DHFR2-203ENST00000461173 CARD10Q9BWT7 1032 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 PDRG1Q9NUG6 133 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
DHFR2-203ENST00000461173 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
DHFR2-203ENST00000461173 PHF14O94880 888 aa11.83□□□□□ -0.51
DHFR2-203ENST00000461173 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.51
DHFR2-203ENST00000461173 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.51
DHFR2-203ENST00000461173 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.51
DHFR2-203ENST00000461173 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.51
DHFR2-203ENST00000461173 ATG3Q9NT62 314 aa11.83□□□□□ -0.51
DHFR2-203ENST00000461173 RBM8AQ9Y5S9 174 aaKnown RBP11.83□□□□□ -0.51
DHFR2-203ENST00000461173 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 NMIQ13287 307 aaPredicted RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 CREB3L3Q68CJ9 461 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
DHFR2-203ENST00000461173 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
DHFR2-203ENST00000461173 KCPQ6ZWJ8 1503 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 STX6O43752 255 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
DHFR2-203ENST00000461173 KRT32Q14532 448 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
DHFR2-203ENST00000461173 FSD1Q9BTV5 496 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
DHFR2-203ENST00000461173 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
DHFR2-203ENST00000461173 A0A087WZG4 1122 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 ESPNB1AK53 854 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 SLC27A2O14975 620 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 HAUS7Q99871 368 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 TMEM63CQ9P1W3 806 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 NUP188Q5SRE5 1749 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
DHFR2-203ENST00000461173 SYT1P21579 422 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 FAM227BQ96M60 508 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
DHFR2-203ENST00000461173 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
DHFR2-203ENST00000461173 TLR7Q9NYK1 1049 aaKnown RBP11.81□□□□□ -0.52
DHFR2-203ENST00000461173 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
DHFR2-203ENST00000461173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.81□□□□□ -0.52
DHFR2-203ENST00000461173 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 CIAO1O76071 339 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 F13A1P00488 732 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 IL2RBP14784 551 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 PDCP20941 246 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms