RNA–Protein interactions for RNA: ENST00000461015.1

NICN1-205, Transcript of nicolin 1, humanhuman

TSL 4

Gene NICN1, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-205ENST00000461015 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
NICN1-205ENST00000461015 KAZALD1Q96I82 304 aa9.95□□□□□ -0.82
NICN1-205ENST00000461015 UTP14AQ9BVJ6 771 aaKnown RBP9.95□□□□□ -0.82
NICN1-205ENST00000461015 CHMP3Q9Y3E7 222 aa9.95□□□□□ -0.82
NICN1-205ENST00000461015 CNTNAP4Q9C0A0 1308 aa9.95□□□□□ -0.82
NICN1-205ENST00000461015 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
NICN1-205ENST00000461015 PDE8AO60658 829 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 CDC45O75419 566 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 GLRX3O76003 335 aaKnown RBP9.94□□□□□ -0.82
NICN1-205ENST00000461015 IL15P40933 162 aaPredicted RBP9.94□□□□□ -0.82
NICN1-205ENST00000461015 CASP7P55210 303 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 FOXO4P98177 505 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
NICN1-205ENST00000461015 TRAPPC3LQ5T215 181 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 TTC22Q5TAA0 569 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
NICN1-205ENST00000461015 BCL11AQ9H165 835 aa9.94□□□□□ -0.82
NICN1-205ENST00000461015 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
NICN1-205ENST00000461015 CIAO1O76071 339 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 CSF1RP07333 972 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 ADRA2BP18089 450 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
NICN1-205ENST00000461015 HLFQ16534 295 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 GPR108Q9NPR9 543 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 CEP126Q9P2H0 1117 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 AKAP2Q9Y2D5 859 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
NICN1-205ENST00000461015 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 ITGB4P16144 1822 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 ANKRD18BA2A2Z9 1011 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
NICN1-205ENST00000461015 CAMTA2O94983 1202 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 REC8O95072 547 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 GPTP24298 496 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 RFC4P35249 363 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 PTPN12Q05209 780 aaKnown RBP9.92□□□□□ -0.82
NICN1-205ENST00000461015 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 FAM89AQ96GI7 184 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 SETDB2Q96T68 719 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 IL1RAPL2Q9NP60 686 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 ECHDC1Q9NTX5 307 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
NICN1-205ENST00000461015 NIP7Q9Y221 180 aaKnown RBP eCLIP9.92□□□□□ -0.82
NICN1-205ENST00000461015 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 EYA2O00167 538 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 HIP1O00291 1037 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 PLSCR1O15162 318 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 RTL5Q5HYW3 569 aaPredicted RBP9.91□□□□□ -0.82
NICN1-205ENST00000461015 EPHA10Q5JZY3 1008 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 TPTE2Q6XPS3 522 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 AACSQ86V21 672 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 RUFY2Q8WXA3 655 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 JARID2Q92833 1246 aaPredicted RBP9.91□□□□□ -0.82
NICN1-205ENST00000461015 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
NICN1-205ENST00000461015 PAPPAQ13219 1627 aa9.91□□□□□ -0.82
NICN1-205ENST00000461015 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
NICN1-205ENST00000461015 GNPATO15228 680 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 SDSP20132 328 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 RFX5P48382 616 aaPredicted RBP9.9□□□□□ -0.82
NICN1-205ENST00000461015 BECN1Q14457 450 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 FAM182BQ5T319 152 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 FLAD1Q8NFF5 587 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 SIL1Q9H173 461 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 PA2G4Q9UQ80 394 aaKnown RBP9.9□□□□□ -0.82
NICN1-205ENST00000461015 LAMB4A4D0S4 1761 aa9.9□□□□□ -0.82
NICN1-205ENST00000461015 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
NICN1-205ENST00000461015 SASH1O94885 1247 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 TRIM37O94972 964 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 CTSWP56202 376 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 LRRFIP1Q32MZ4 808 aaKnown RBP9.89□□□□□ -0.83
NICN1-205ENST00000461015 SLC10A5Q5PT55 438 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 SUSD4Q5VX71 490 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 LDHAL6AQ6ZMR3 332 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 NUTM1Q86Y26 1132 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 TTLL11Q8NHH1 800 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 RILPL2Q969X0 211 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 TOGARAM1Q9Y4F4 1720 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 C5P01031 1676 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 WNK3Q9BYP7 1800 aa9.89□□□□□ -0.83
NICN1-205ENST00000461015 GORABQ5T7V8 394 aa9.88□□□□□ -0.83
NICN1-205ENST00000461015 TBC1D9Q6ZT07 1266 aa9.88□□□□□ -0.83
NICN1-205ENST00000461015 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
NICN1-205ENST00000461015 MPHOSPH8Q99549 860 aa9.88□□□□□ -0.83
NICN1-205ENST00000461015 CNNM1Q9NRU3 951 aa9.88□□□□□ -0.83
NICN1-205ENST00000461015 GLI3P10071 1580 aa9.88□□□□□ -0.83
NICN1-205ENST00000461015 SALL3Q9BXA9 1300 aa9.87□□□□□ -0.83
NICN1-205ENST00000461015 NPHP1O15259 732 aa9.87□□□□□ -0.83
NICN1-205ENST00000461015 APBA3O96018 575 aa9.87□□□□□ -0.83
NICN1-205ENST00000461015 GSPT1P15170 499 aaKnown RBP9.87□□□□□ -0.83
NICN1-205ENST00000461015 ATP5JP18859 108 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms