RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-206ENST00000460767 SYNE4Q8N205 404 aa18.06■□□□□ 0.48
SCAMP4-206ENST00000460767 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
SCAMP4-206ENST00000460767 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCAMP4-206ENST00000460767 KCNQ3O43525 872 aa18.05■□□□□ 0.48
SCAMP4-206ENST00000460767 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-206ENST00000460767 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
SCAMP4-206ENST00000460767 CAPNS2Q96L46 248 aa18.05■□□□□ 0.48
SCAMP4-206ENST00000460767 LMOD1P29536 600 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-206ENST00000460767 SCNN1DP51172 638 aa18.04■□□□□ 0.48
SCAMP4-206ENST00000460767 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-206ENST00000460767 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-206ENST00000460767 TLL2Q9Y6L7 1015 aa18.04■□□□□ 0.48
SCAMP4-206ENST00000460767 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 CA12O43570 354 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 MAP2K2P36507 400 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
SCAMP4-206ENST00000460767 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-206ENST00000460767 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
SCAMP4-206ENST00000460767 HHIPL1Q96JK4 782 aa18.02■□□□□ 0.48
SCAMP4-206ENST00000460767 ADAMTS8Q9UP79 889 aa18.02■□□□□ 0.48
SCAMP4-206ENST00000460767 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
SCAMP4-206ENST00000460767 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.47
SCAMP4-206ENST00000460767 NUP98P52948 1817 aa18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 GPR101Q96P66 508 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-206ENST00000460767 CST9Q5W186 159 aa18■□□□□ 0.47
SCAMP4-206ENST00000460767 VPS33BQ9H267 617 aa18■□□□□ 0.47
SCAMP4-206ENST00000460767 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
SCAMP4-206ENST00000460767 CYP4F22Q6NT55 531 aa17.99■□□□□ 0.47
SCAMP4-206ENST00000460767 MCM10Q7L590 875 aa17.99■□□□□ 0.47
SCAMP4-206ENST00000460767 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
SCAMP4-206ENST00000460767 CCDC85CA6NKD9 419 aa17.98■□□□□ 0.47
SCAMP4-206ENST00000460767 EPS15P42566 896 aa17.98■□□□□ 0.47
SCAMP4-206ENST00000460767 HLFQ16534 295 aa17.98■□□□□ 0.47
SCAMP4-206ENST00000460767 TMPOP42166 694 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 BRPF1P55201 1214 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 SAPCD2Q86UD0 394 aa17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 LARGE2Q8N3Y3 721 aa17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
SCAMP4-206ENST00000460767 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-206ENST00000460767 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
SCAMP4-206ENST00000460767 ADARB2Q9NS39 739 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-206ENST00000460767 PGAP2Q9UHJ9 254 aa17.96■□□□□ 0.47
SCAMP4-206ENST00000460767 FMR1Q06787 632 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCAMP4-206ENST00000460767 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-206ENST00000460767 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
SCAMP4-206ENST00000460767 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
SCAMP4-206ENST00000460767 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
SCAMP4-206ENST00000460767 TRAF5O00463 557 aa17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 ANP32CO43423 234 aa17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 MCOLN1Q9GZU1 580 aa17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
SCAMP4-206ENST00000460767 TAF7Q15545 349 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-206ENST00000460767 NUTM1Q86Y26 1132 aa17.93■□□□□ 0.46
SCAMP4-206ENST00000460767 ZC3H15Q8WU90 426 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-206ENST00000460767 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
SCAMP4-206ENST00000460767 FAM177BA6PVY3 158 aa17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 NEFMP07197 916 aa17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 CCDC146Q8IYE0 955 aa17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-206ENST00000460767 AOC2O75106 756 aa17.91■□□□□ 0.46
SCAMP4-206ENST00000460767 RIPK4P57078 832 aa17.91■□□□□ 0.46
SCAMP4-206ENST00000460767 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-206ENST00000460767 ANKRD36CQ5JPF3 1778 aa17.91■□□□□ 0.46
SCAMP4-206ENST00000460767 PPIP5K2O43314 1243 aa17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 CELF2O95319 508 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 NTSR2O95665 410 aa17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 ZNRF3Q9ULT6 936 aa17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 CASP8AP2Q9UKL3 1982 aa17.9■□□□□ 0.46
SCAMP4-206ENST00000460767 NOGQ13253 232 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 GRM1Q13255 1194 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 ZNF34Q8IZ26 560 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 BABAM1Q9NWV8 329 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 TSKSQ9UJT2 592 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
SCAMP4-206ENST00000460767 CXCL9Q07325 125 aa17.88■□□□□ 0.45
SCAMP4-206ENST00000460767 AOC3Q16853 763 aa17.88■□□□□ 0.45
SCAMP4-206ENST00000460767 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-206ENST00000460767 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
SCAMP4-206ENST00000460767 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
SCAMP4-206ENST00000460767 LAMB2P55268 1798 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms