RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 ATP7BP35670 1465 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 MPHOSPH10O00566 681 aaKnown RBP20.7■□□□□ 0.91
CHRD-208ENST00000460627 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.91
CHRD-208ENST00000460627 TBC1D32Q96NH3 1257 aa20.7■□□□□ 0.9
CHRD-208ENST00000460627 ZMYM4Q5VZL5 1548 aa20.7■□□□□ 0.9
CHRD-208ENST00000460627 DDX17Q92841 729 aaKnown RBP20.7■□□□□ 0.9
CHRD-208ENST00000460627 SEC63Q9UGP8 760 aaKnown RBP20.7■□□□□ 0.9
CHRD-208ENST00000460627 STIM1Q13586 685 aa20.69■□□□□ 0.9
CHRD-208ENST00000460627 GSTO1P78417 241 aa20.69■□□□□ 0.9
CHRD-208ENST00000460627 C8orf76Q96K31 380 aa20.69■□□□□ 0.9
CHRD-208ENST00000460627 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
CHRD-208ENST00000460627 BLMP54132 1417 aaPredicted RBP20.69■□□□□ 0.9
CHRD-208ENST00000460627 OFD1O75665 1012 aa20.69■□□□□ 0.9
CHRD-208ENST00000460627 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
CHRD-208ENST00000460627 MAGEC2Q9UBF1 373 aaPredicted RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 PA2G4Q9UQ80 394 aaKnown RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 ROBO2Q9HCK4 1378 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 PARP10Q53GL7 1025 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 G2E3Q7L622 706 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 TBC1D2Q9BYX2 928 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 ZBTB7BO15156 539 aaPredicted RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 PDE4BQ07343 736 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 FERMT3Q86UX7 667 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 METTL22Q9BUU2 404 aaPredicted RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 ZNF219Q9P2Y4 722 aaPredicted RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 KIF1BO60333 1816 aa20.68■□□□□ 0.9
CHRD-208ENST00000460627 CRNKL1Q9BZJ0 848 aaKnown RBP20.68■□□□□ 0.9
CHRD-208ENST00000460627 KIAA0232Q92628 1395 aa20.67■□□□□ 0.9
CHRD-208ENST00000460627 NCOA7Q8NI08 942 aa20.67■□□□□ 0.9
CHRD-208ENST00000460627 BMP2KQ9NSY1 1161 aaPredicted RBP20.67■□□□□ 0.9
CHRD-208ENST00000460627 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
CHRD-208ENST00000460627 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
CHRD-208ENST00000460627 ZNF592Q92610 1267 aa20.67■□□□□ 0.9
CHRD-208ENST00000460627 A0A0U1RQG5 324 aaPredicted RBP20.66■□□□□ 0.9
CHRD-208ENST00000460627 ANAPC15P60006 121 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 GOLGA6L1Q8N7Z2 621 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 NUP62CLQ9H1M0 184 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 GOLGA8AA7E2F4 631 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 CCDC191Q8NCU4 936 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 ESYT1Q9BSJ8 1104 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
CHRD-208ENST00000460627 DHX8Q14562 1220 aaKnown RBP20.65■□□□□ 0.9
CHRD-208ENST00000460627 PIBF1Q8WXW3 757 aa20.65■□□□□ 0.9
CHRD-208ENST00000460627 TFCP2L1Q9NZI6 479 aa20.65■□□□□ 0.9
CHRD-208ENST00000460627 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
CHRD-208ENST00000460627 SMC2O95347 1197 aa20.64■□□□□ 0.9
CHRD-208ENST00000460627 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.89
CHRD-208ENST00000460627 SH3TC1Q8TE82 1336 aa20.64■□□□□ 0.89
CHRD-208ENST00000460627 HLA-DOAP06340 250 aa20.64■□□□□ 0.89
CHRD-208ENST00000460627 PDILTQ8N807 584 aa20.64■□□□□ 0.89
CHRD-208ENST00000460627 EIF4A1P60842 406 aaKnown RBP20.63■□□□□ 0.89
CHRD-208ENST00000460627 PDE4CQ08493 712 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 TMEM67Q5HYA8 995 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
CHRD-208ENST00000460627 ZNF76P36508 570 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 GNPATO15228 680 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 CYP7A1P22680 504 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 KIF5BP33176 963 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 BICC1Q9H694 974 aaKnown RBP20.63■□□□□ 0.89
CHRD-208ENST00000460627 KDM5CP41229 1560 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 MCM5P33992 734 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
CHRD-208ENST00000460627 CEP57L1Q8IYX8 460 aa20.63■□□□□ 0.89
CHRD-208ENST00000460627 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 HAND2P61296 217 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
CHRD-208ENST00000460627 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.894e-7■■□□□ 13.4
CHRD-208ENST00000460627 USP6P35125 1406 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 SSRP1Q08945 709 aaKnown RBP20.62■□□□□ 0.89
CHRD-208ENST00000460627 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
CHRD-208ENST00000460627 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
CHRD-208ENST00000460627 SMARCE1Q969G3 411 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 SLC9C2Q5TAH2 1124 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 ARHGEF25Q86VW2 580 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 SYNMO15061 1565 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
CHRD-208ENST00000460627 CCDC96Q2M329 555 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 NAA16Q6N069 864 aaPredicted RBP20.61■□□□□ 0.89
CHRD-208ENST00000460627 RBM8AQ9Y5S9 174 aaKnown RBP20.61■□□□□ 0.89
CHRD-208ENST00000460627 ZNF804AQ7Z570 1209 aa20.61■□□□□ 0.89
CHRD-208ENST00000460627 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
CHRD-208ENST00000460627 KRT23Q9C075 422 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 KIF24Q5T7B8 1368 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 PHKG2P15735 406 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 CNNM2Q9H8M5 875 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 USP19O94966 1318 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
CHRD-208ENST00000460627 A1BGP04217 495 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 DNAJC10Q8IXB1 793 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 CCDC82Q8N4S0 544 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 ZC3H12CQ9C0D7 883 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms