RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 MASTLQ96GX5 879 aa21.2■□□□□ 0.98
SMARCD3-204ENST00000460431 MYH16Q9H6N6 1097 aa21.2■□□□□ 0.98
SMARCD3-204ENST00000460431 VAMP4O75379 141 aa21.19■□□□□ 0.98
SMARCD3-204ENST00000460431 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
SMARCD3-204ENST00000460431 NLRP10Q86W26 655 aa21.19■□□□□ 0.98
SMARCD3-204ENST00000460431 SLX4Q8IY92 1834 aa21.19■□□□□ 0.98
SMARCD3-204ENST00000460431 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 TOMM70O94826 608 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 PRELPP51888 382 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 RASSF7Q02833 373 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 CNKSR1Q969H4 720 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 UTP14AQ9BVJ6 771 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 SBF1O95248 1867 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 CACNA1SQ13698 1873 aa21.18■□□□□ 0.98
SMARCD3-204ENST00000460431 ISCA1Q9BUE6 129 aa21.17■□□□□ 0.98
SMARCD3-204ENST00000460431 STK31Q9BXU1 1019 aa21.17■□□□□ 0.98
SMARCD3-204ENST00000460431 ABCC12Q96J65 1359 aa21.17■□□□□ 0.98
SMARCD3-204ENST00000460431 RIC1Q4ADV7 1423 aa21.17■□□□□ 0.98
SMARCD3-204ENST00000460431 RNF123Q5XPI4 1314 aa21.16■□□□□ 0.98
SMARCD3-204ENST00000460431 NPR1P16066 1061 aa21.16■□□□□ 0.98
SMARCD3-204ENST00000460431 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
SMARCD3-204ENST00000460431 SLC10A5Q5PT55 438 aa21.16■□□□□ 0.98
SMARCD3-204ENST00000460431 RIC3Q7Z5B4 369 aa21.16■□□□□ 0.98
SMARCD3-204ENST00000460431 TNRC6CQ9HCJ0 1690 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 SLC4A2P04920 1241 aa21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 LMNB1P20700 586 aa21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 TRIM28Q13263 835 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-204ENST00000460431 KDM2BQ8NHM5 1336 aa21.14■□□□□ 0.97
SMARCD3-204ENST00000460431 NFKBIEO00221 500 aa21.14■□□□□ 0.97
SMARCD3-204ENST00000460431 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.97
SMARCD3-204ENST00000460431 ATP5J2-PTCD1G3V325 749 aa21.13■□□□□ 0.97
SMARCD3-204ENST00000460431 PRPF40BQ6NWY9 871 aaKnown RBP21.13■□□□□ 0.97
SMARCD3-204ENST00000460431 TRMT112Q9UI30 125 aaKnown RBP21.13■□□□□ 0.97
SMARCD3-204ENST00000460431 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
SMARCD3-204ENST00000460431 ZC3H4Q9UPT8 1303 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 FER1L6Q2WGJ9 1857 aa21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 E9PSI1 815 aa21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 C21orf2O43822 256 aa21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 KSR2Q6VAB6 950 aa21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 G2E3Q7L622 706 aa21.12■□□□□ 0.97
SMARCD3-204ENST00000460431 SH3TC1Q8TE82 1336 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 HOXA10P31260 410 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 SLFN5Q08AF3 891 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 C7orf43Q8WVR3 580 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 NLRP3Q96P20 1036 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 METTL22Q9BUU2 404 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 RRAGCQ9HB90 399 aa21.11■□□□□ 0.97
SMARCD3-204ENST00000460431 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 C3orf67Q6ZVT6 689 aa21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 ZNF219Q9P2Y4 722 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 MAP3K2Q9Y2U5 619 aa21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 LAMB2P55268 1798 aa21.1■□□□□ 0.97
SMARCD3-204ENST00000460431 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
SMARCD3-204ENST00000460431 MYD88Q99836 296 aa21.09■□□□□ 0.97
SMARCD3-204ENST00000460431 HCLS1P14317 486 aaPredicted RBP21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 FLIIQ13045 1269 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 SOGA3Q5TF21 947 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 CCDC191Q8NCU4 936 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 ZNF428Q96B54 188 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 FAM89AQ96GI7 184 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 CRAMP1Q96RY5 1269 aa21.08■□□□□ 0.97
SMARCD3-204ENST00000460431 GLTPD2A6NH11 291 aa21.07■□□□□ 0.96
SMARCD3-204ENST00000460431 TRMT2AQ8IZ69 625 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-204ENST00000460431 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
SMARCD3-204ENST00000460431 RBM17Q96I25 401 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-204ENST00000460431 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-204ENST00000460431 APLP1P51693 650 aa21.06■□□□□ 0.96
SMARCD3-204ENST00000460431 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
SMARCD3-204ENST00000460431 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
SMARCD3-204ENST00000460431 CWC25Q9NXE8 425 aaPredicted RBP21.05■□□□□ 0.96
SMARCD3-204ENST00000460431 DICER1Q9UPY3 1922 aaKnown RBP21.05■□□□□ 0.96
SMARCD3-204ENST00000460431 LTBP3Q9NS15 1303 aa21.04■□□□□ 0.96
SMARCD3-204ENST00000460431 IGKV5-2P06315 115 aa21.04■□□□□ 0.96
SMARCD3-204ENST00000460431 FSTL1Q12841 308 aa21.04■□□□□ 0.96
SMARCD3-204ENST00000460431 FKBP5Q13451 457 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-204ENST00000460431 PCCAP05165 728 aaPredicted RBP21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 NEXNQ0ZGT2 675 aa21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 CCDC93Q567U6 631 aa21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 RTL5Q5HYW3 569 aaPredicted RBP21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 DNAJC5GQ8N7S2 189 aa21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 TAF1P21675 1872 aa21.03■□□□□ 0.96
SMARCD3-204ENST00000460431 IRS4O14654 1257 aaPredicted RBP21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 SF3B3Q15393 1217 aaKnown RBP21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 DNAAF4Q8WXU2 420 aa21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 TAOK3Q9H2K8 898 aa21.02■□□□□ 0.96
SMARCD3-204ENST00000460431 POTECB2RU33 542 aa21.01■□□□□ 0.95
SMARCD3-204ENST00000460431 CC2D2BQ6DHV5 1058 aa21.01■□□□□ 0.95
SMARCD3-204ENST00000460431 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
SMARCD3-204ENST00000460431 NEURL1BA8MQ27 555 aa21■□□□□ 0.95
SMARCD3-204ENST00000460431 HSP90B1P14625 803 aaKnown RBP21■□□□□ 0.95
SMARCD3-204ENST00000460431 DPY19L2Q6NUT2 758 aa21■□□□□ 0.95
SMARCD3-204ENST00000460431 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms