RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.257e-65■■□□□ 11.9
FN1-214ENST00000460217 GRM8O00222 908 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 GNAI3P08754 354 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 GPTP24298 496 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 FKBP8Q14318 412 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
FN1-214ENST00000460217 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
FN1-214ENST00000460217 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
FN1-214ENST00000460217 NFIXQ14938 502 aa13.49□□□□□ -0.25
FN1-214ENST00000460217 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
FN1-214ENST00000460217 MEIS3Q99687 375 aa13.49□□□□□ -0.25
FN1-214ENST00000460217 ZBTB40Q9NUA8 1239 aa13.49□□□□□ -0.25
FN1-214ENST00000460217 LAMB2P55268 1798 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 H7C1W4 665 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
FN1-214ENST00000460217 TM4SF1P30408 202 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
FN1-214ENST00000460217 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
FN1-214ENST00000460217 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 MYH3P11055 1940 aa13.48□□□□□ -0.25
FN1-214ENST00000460217 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
FN1-214ENST00000460217 NTSR2O95665 410 aa13.47□□□□□ -0.25
FN1-214ENST00000460217 NBPF7P0C2Y1 421 aaPredicted RBP13.47□□□□□ -0.25
FN1-214ENST00000460217 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
FN1-214ENST00000460217 CASP7P55210 303 aa13.47□□□□□ -0.25
FN1-214ENST00000460217 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
FN1-214ENST00000460217 UTP14AQ9BVJ6 771 aaKnown RBP13.47□□□□□ -0.25
FN1-214ENST00000460217 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
FN1-214ENST00000460217 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.25
FN1-214ENST00000460217 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
FN1-214ENST00000460217 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
FN1-214ENST00000460217 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
FN1-214ENST00000460217 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
FN1-214ENST00000460217 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
FN1-214ENST00000460217 SOCS7O14512 581 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 GNAI2P04899 355 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 DDR1Q08345 913 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
FN1-214ENST00000460217 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 PDGFDQ9GZP0 370 aaPredicted RBP13.45□□□□□ -0.26
FN1-214ENST00000460217 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
FN1-214ENST00000460217 RIC1Q4ADV7 1423 aa13.45□□□□□ -0.26
FN1-214ENST00000460217 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
FN1-214ENST00000460217 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
FN1-214ENST00000460217 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
FN1-214ENST00000460217 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
FN1-214ENST00000460217 MMP10P09238 476 aa13.43□□□□□ -0.26
FN1-214ENST00000460217 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
FN1-214ENST00000460217 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
FN1-214ENST00000460217 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
FN1-214ENST00000460217 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
FN1-214ENST00000460217 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
FN1-214ENST00000460217 SERPINB2P05120 415 aa13.42□□□□□ -0.26
FN1-214ENST00000460217 MTX1Q13505 466 aa13.42□□□□□ -0.26
FN1-214ENST00000460217 RABL6Q3YEC7 729 aaPredicted RBP13.42□□□□□ -0.26
FN1-214ENST00000460217 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
FN1-214ENST00000460217 LRRFIP2Q9Y608 721 aaKnown RBP13.42□□□□□ -0.26
FN1-214ENST00000460217 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
FN1-214ENST00000460217 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
FN1-214ENST00000460217 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
FN1-214ENST00000460217 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
FN1-214ENST00000460217 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
FN1-214ENST00000460217 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
FN1-214ENST00000460217 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 PDE8AO60658 829 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 FOXO4P98177 505 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 RTL5Q5HYW3 569 aaPredicted RBP13.4□□□□□ -0.26
FN1-214ENST00000460217 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
FN1-214ENST00000460217 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
FN1-214ENST00000460217 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 ZBTB7AO95365 584 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 CSF1RP07333 972 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 CTSWP56202 376 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 ST5P78524 1137 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 EPHA10Q5JZY3 1008 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
FN1-214ENST00000460217 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
FN1-214ENST00000460217 NPHP1O15259 732 aa13.38□□□□□ -0.27
FN1-214ENST00000460217 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
FN1-214ENST00000460217 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
FN1-214ENST00000460217 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
FN1-214ENST00000460217 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
FN1-214ENST00000460217 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
FN1-214ENST00000460217 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
FN1-214ENST00000460217 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms