RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-208	ENST00000460132	TAOK3	Q9H2K8	898 aa		18.93	■□□□□ 0.62
PLOD3-208	ENST00000460132	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	HOXA10	P31260	410 aa	Predicted RBP	18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	NCBP3	Q53F19	620 aa	Known RBP	18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	SLC10A5	Q5PT55	438 aa		18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	OLFM4	Q6UX06	510 aa		18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	KDM2B	Q8NHM5	1336 aa		18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	LTBP3	Q9NS15	1303 aa		18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.92	■□□□□ 0.62
PLOD3-208	ENST00000460132	RIC1	Q4ADV7	1423 aa		18.91	■□□□□ 0.62
PLOD3-208	ENST00000460132	TSPYL6	Q8N831	410 aa		18.91	■□□□□ 0.62
PLOD3-208	ENST00000460132	RPGR	Q92834	1020 aa	Known RBP	18.91	■□□□□ 0.62
PLOD3-208	ENST00000460132	SALL2	Q9Y467	1007 aa	Predicted RBP	18.91	■□□□□ 0.62
PLOD3-208	ENST00000460132	CCDC93	Q567U6	631 aa		18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	FAM9B	Q8IZU0	186 aa		18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	SYNE4	Q8N205	404 aa		18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	ZNF428	Q96B54	188 aa		18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	NLRP3	Q96P20	1036 aa		18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	PHAX	Q9H814	394 aa	Known RBP	18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	TRMT112	Q9UI30	125 aa	Known RBP	18.9	■□□□□ 0.62
PLOD3-208	ENST00000460132	ARFGEF2	Q9Y6D5	1785 aa		18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	CACNA1S	Q13698	1873 aa		18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	FER1L6	Q2WGJ9	1857 aa		18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	GLTPD2	A6NH11	291 aa		18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	RBM17	Q96I25	401 aa	Known RBP	18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	RRAGC	Q9HB90	399 aa		18.89	■□□□□ 0.61
PLOD3-208	ENST00000460132	ATP5J2-PTCD1	G3V325	749 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	HCLS1	P14317	486 aa	Predicted RBP	18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	CCDC30	Q5VVM6	783 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	RTKN2	Q8IZC4	609 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	CRAMP1	Q96RY5	1269 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	ISCA1	Q9BUE6	129 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	IL16	Q14005	1332 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	RNF123	Q5XPI4	1314 aa		18.88	■□□□□ 0.61
PLOD3-208	ENST00000460132	TOMM70	O94826	608 aa		18.87	■□□□□ 0.61
PLOD3-208	ENST00000460132	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
PLOD3-208	ENST00000460132	SH3TC1	Q8TE82	1336 aa		18.87	■□□□□ 0.61
PLOD3-208	ENST00000460132	CCDC88A	Q3V6T2	1871 aa		18.86	■□□□□ 0.61
PLOD3-208	ENST00000460132	RIC3	Q7Z5B4	369 aa		18.86	■□□□□ 0.61
PLOD3-208	ENST00000460132	WDR63	Q8IWG1	891 aa		18.86	■□□□□ 0.61
PLOD3-208	ENST00000460132	CHMP4A	Q9BY43	222 aa		18.86	■□□□□ 0.61
PLOD3-208	ENST00000460132	TCERG1	O14776	1098 aa	Known RBP	18.85	■□□□□ 0.61
PLOD3-208	ENST00000460132	GOLGA2	Q08379	1002 aa		18.85	■□□□□ 0.61
PLOD3-208	ENST00000460132	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.85	■□□□□ 0.61
PLOD3-208	ENST00000460132	ANKRD36C	Q5JPF3	1778 aa		18.85	■□□□□ 0.61
PLOD3-208	ENST00000460132	TRIM28	Q13263	835 aa	Known RBP	18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	TWISTNB	Q3B726	338 aa	Predicted RBP	18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	CC2D2B	Q6DHV5	1058 aa		18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	DPY19L2	Q6NUT2	758 aa		18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	SLC51A	Q86UW1	340 aa		18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	FAM89A	Q96GI7	184 aa		18.84	■□□□□ 0.61
PLOD3-208	ENST00000460132	PPEF1	O14829	653 aa	Predicted RBP	18.83	■□□□□ 0.6
PLOD3-208	ENST00000460132	TIAM2	Q8IVF5	1701 aa		18.83	■□□□□ 0.6
PLOD3-208	ENST00000460132	SNED1	Q8TER0	1413 aa		18.83	■□□□□ 0.6
PLOD3-208	ENST00000460132	ABCC4	O15439	1325 aa		18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	FANCI	Q9NVI1	1328 aa		18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	POTEC	B2RU33	542 aa		18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	VEGFA	P15692	232 aa	Predicted RBP	18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	HSPA6	P17066	643 aa		18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	RTL5	Q5HYW3	569 aa	Predicted RBP	18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	PSMD1	Q99460	953 aa		18.82	■□□□□ 0.6
PLOD3-208	ENST00000460132	DDX58	O95786	925 aa	Known RBP	18.81	■□□□□ 0.6
PLOD3-208	ENST00000460132	RBM46	Q8TBY0	533 aa	Known RBP	18.81	■□□□□ 0.6
PLOD3-208	ENST00000460132	MYD88	Q99836	296 aa		18.81	■□□□□ 0.6
PLOD3-208	ENST00000460132	STK31	Q9BXU1	1019 aa		18.81	■□□□□ 0.6
PLOD3-208	ENST00000460132	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.81	■□□□□ 0.6
PLOD3-208	ENST00000460132	BBOX1	O75936	387 aa		18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	DDN	O94850	711 aa	Predicted RBP	18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	IARS	P41252	1262 aa	Known RBP	18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	GRIPAP1	Q4V328	841 aa		18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	DDX46	Q7L014	1031 aa	Known RBP	18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	ATP6V0A2	Q9Y487	856 aa		18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	DICER1	Q9UPY3	1922 aa	Known RBP	18.8	■□□□□ 0.6
PLOD3-208	ENST00000460132	SLC4A2	P04920	1241 aa		18.79	■□□□□ 0.6
PLOD3-208	ENST00000460132	KSR2	Q6VAB6	950 aa		18.79	■□□□□ 0.6
PLOD3-208	ENST00000460132	G2E3	Q7L622	706 aa		18.79	■□□□□ 0.6
PLOD3-208	ENST00000460132	METTL22	Q9BUU2	404 aa	Predicted RBP	18.79	■□□□□ 0.6
PLOD3-208	ENST00000460132	MAP3K2	Q9Y2U5	619 aa		18.79	■□□□□ 0.6
PLOD3-208	ENST00000460132	PI4KAP2	A4QPH2	592 aa		18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	IRS4	O14654	1257 aa	Predicted RBP	18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	VAMP4	O75379	141 aa		18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	EXOSC9	Q06265	439 aa	Known RBP	18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	PI4KAP1	Q8N8J0	262 aa		18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	CCDC191	Q8NCU4	936 aa		18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	TMX4	Q9H1E5	349 aa	Predicted RBP	18.78	■□□□□ 0.6
PLOD3-208	ENST00000460132	GRAP	Q13588	217 aa		18.77	■□□□□ 0.6
PLOD3-208	ENST00000460132	SF3B3	Q15393	1217 aa	Known RBP	18.77	■□□□□ 0.6
PLOD3-208	ENST00000460132	SP8	Q8IXZ3	490 aa		18.77	■□□□□ 0.6
PLOD3-208	ENST00000460132	GRAPL	Q8TC17	118 aa	Predicted RBP	18.77	■□□□□ 0.6
PLOD3-208	ENST00000460132	ZNF541	Q9H0D2	1346 aa		18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	LAMB2	P55268	1798 aa		18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	FZD9	O00144	591 aa		18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	FSTL1	Q12841	308 aa		18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	JARID2	Q92833	1246 aa	Predicted RBP	18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	CWC25	Q9NXE8	425 aa	Predicted RBP	18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	CEP350	Q5VT06	3117 aa		18.76	■□□□□ 0.59
PLOD3-208	ENST00000460132	WDR90	Q96KV7	1748 aa		18.75	■□□□□ 0.59
PLOD3-208	ENST00000460132	JDP2	Q8WYK2	163 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms