RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 CST9Q5W186 159 aa15.15■□□□□ 0.02
PRAMEF35P-201ENST00000458709 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
PRAMEF35P-201ENST00000458709 SLC51AQ86UW1 340 aa15.15■□□□□ 0.02
PRAMEF35P-201ENST00000458709 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
PRAMEF35P-201ENST00000458709 PSMD1Q99460 953 aa15.15■□□□□ 0.02
PRAMEF35P-201ENST00000458709 ABCC12Q96J65 1359 aa15.14■□□□□ 0.01
PRAMEF35P-201ENST00000458709 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
PRAMEF35P-201ENST00000458709 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
PRAMEF35P-201ENST00000458709 EIF6P56537 245 aaKnown RBP15.14■□□□□ 0.01
PRAMEF35P-201ENST00000458709 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
PRAMEF35P-201ENST00000458709 NBPF26B4DH59 902 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 NBPF10Q6P3W6 841 aaKnown RBP15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 NBPF15Q8N660 670 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 MCOLN1Q9GZU1 580 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 TLL2Q9Y6L7 1015 aa15.13■□□□□ 0.01
PRAMEF35P-201ENST00000458709 HLFQ16534 295 aa15.12■□□□□ 0.01
PRAMEF35P-201ENST00000458709 CRY2Q49AN0 593 aa15.11■□□□□ 0.01
PRAMEF35P-201ENST00000458709 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
PRAMEF35P-201ENST00000458709 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
PRAMEF35P-201ENST00000458709 SNRPA1P09661 255 aaKnown RBP15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 MAP2K2P36507 400 aa15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 USP50Q70EL3 339 aaPredicted RBP15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
PRAMEF35P-201ENST00000458709 RGL2O15211 777 aa15.09■□□□□ 0.01
PRAMEF35P-201ENST00000458709 SAPCD2Q86UD0 394 aa15.09■□□□□ 0.01
PRAMEF35P-201ENST00000458709 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
PRAMEF35P-201ENST00000458709 CELF2O95319 508 aaKnown RBP15.08■□□□□ 0
PRAMEF35P-201ENST00000458709 PRKAR2BP31323 418 aa15.08■□□□□ 0
PRAMEF35P-201ENST00000458709 CC2D2BQ6DHV5 1058 aa15.08■□□□□ 0
PRAMEF35P-201ENST00000458709 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 CA12O43570 354 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 DGKZQ13574 1117 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 MCM10Q7L590 875 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 NIM1KQ8IY84 436 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
PRAMEF35P-201ENST00000458709 BRPF1P55201 1214 aaPredicted RBP15.06■□□□□ 0
PRAMEF35P-201ENST00000458709 GLIS2Q9BZE0 524 aaPredicted RBP15.06■□□□□ 0
PRAMEF35P-201ENST00000458709 ADARB2Q9NS39 739 aaKnown RBP15.06■□□□□ 0
PRAMEF35P-201ENST00000458709 PPEF1O14829 653 aaPredicted RBP15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 PPIP5K2O43314 1243 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 AOC3Q16853 763 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 CIAPIN1Q6FI81 312 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 NGEFQ8N5V2 710 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 NYXQ9GZU5 481 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 ZNF408Q9H9D4 720 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 UBN2Q6ZU65 1347 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 CASP8AP2Q9UKL3 1982 aa15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ -0
PRAMEF35P-201ENST00000458709 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
PRAMEF35P-201ENST00000458709 DCTN1Q14203 1278 aa15.04■□□□□ -0
PRAMEF35P-201ENST00000458709 C3orf67Q6ZVT6 689 aa15.04■□□□□ -0
PRAMEF35P-201ENST00000458709 HHIPL1Q96JK4 782 aa15.04■□□□□ -0
PRAMEF35P-201ENST00000458709 ZIC5Q96T25 663 aa15.04■□□□□ -0
PRAMEF35P-201ENST00000458709 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
PRAMEF35P-201ENST00000458709 GPTP24298 496 aa15.03■□□□□ -0
PRAMEF35P-201ENST00000458709 GMPSP49915 693 aaPredicted RBP15.03■□□□□ -0
PRAMEF35P-201ENST00000458709 CXCL9Q07325 125 aa15.03■□□□□ -0
PRAMEF35P-201ENST00000458709 IBTKQ9P2D0 1353 aaPredicted RBP15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 MAP3K15Q6ZN16 1313 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 SUSD4Q5VX71 490 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 TTLL7Q6ZT98 887 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 RTF1Q92541 710 aaKnown RBP15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 RBM17Q96I25 401 aaKnown RBP15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
PRAMEF35P-201ENST00000458709 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 HIRAP54198 1017 aaPredicted RBP15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 TRPM4Q8TD43 1214 aa15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 NUP98P52948 1817 aa15.01□□□□□ -0.01
PRAMEF35P-201ENST00000458709 NTSR2O95665 410 aa15□□□□□ -0.01
PRAMEF35P-201ENST00000458709 SOX10P56693 466 aa15□□□□□ -0.01
PRAMEF35P-201ENST00000458709 ZBTB3Q9H5J0 574 aa15□□□□□ -0.01
PRAMEF35P-201ENST00000458709 PGAP2Q9UHJ9 254 aa15□□□□□ -0.01
PRAMEF35P-201ENST00000458709 ZNRF3Q9ULT6 936 aa15□□□□□ -0.01
PRAMEF35P-201ENST00000458709 SHTN1A0MZ66 631 aa14.99□□□□□ -0.01
PRAMEF35P-201ENST00000458709 NOGQ13253 232 aa14.99□□□□□ -0.01
PRAMEF35P-201ENST00000458709 DLK2Q6UY11 383 aa14.99□□□□□ -0.01
PRAMEF35P-201ENST00000458709 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
PRAMEF35P-201ENST00000458709 RAD17O75943 681 aa14.98□□□□□ -0.01
PRAMEF35P-201ENST00000458709 KIF6Q6ZMV9 814 aa14.98□□□□□ -0.01
PRAMEF35P-201ENST00000458709 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
PRAMEF35P-201ENST00000458709 ABCC4O15439 1325 aa14.97□□□□□ -0.01
PRAMEF35P-201ENST00000458709 CDHR2Q9BYE9 1310 aa14.97□□□□□ -0.01
PRAMEF35P-201ENST00000458709 MYL6BP14649 208 aa14.97□□□□□ -0.01
PRAMEF35P-201ENST00000458709 HUNKP57058 714 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms