RNA–Protein interactions for RNA: ENST00000458499.5

VGLL4-215, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-215ENST00000458499 SLX4Q8IY92 1834 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 KIF3CO14782 793 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 C3orf67Q6ZVT6 689 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
VGLL4-215ENST00000458499 ZNF428Q96B54 188 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 TAOK3Q9H2K8 898 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
VGLL4-215ENST00000458499 NMRK2Q9NPI5 230 aa18.05■□□□□ 0.48
VGLL4-215ENST00000458499 IL16Q14005 1332 aa18.04■□□□□ 0.48
VGLL4-215ENST00000458499 CCDC93Q567U6 631 aa18.04■□□□□ 0.48
VGLL4-215ENST00000458499 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
VGLL4-215ENST00000458499 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
VGLL4-215ENST00000458499 LTBP3Q9NS15 1303 aa18.03■□□□□ 0.48
VGLL4-215ENST00000458499 HOXA10P31260 410 aaPredicted RBP18.03■□□□□ 0.48
VGLL4-215ENST00000458499 SLC10A5Q5PT55 438 aa18.03■□□□□ 0.48
VGLL4-215ENST00000458499 NLRP3Q96P20 1036 aa18.03■□□□□ 0.48
VGLL4-215ENST00000458499 TRMT112Q9UI30 125 aaKnown RBP18.03■□□□□ 0.48
VGLL4-215ENST00000458499 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
VGLL4-215ENST00000458499 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.48
VGLL4-215ENST00000458499 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
VGLL4-215ENST00000458499 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
VGLL4-215ENST00000458499 KDM2BQ8NHM5 1336 aa18.01■□□□□ 0.47
VGLL4-215ENST00000458499 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
VGLL4-215ENST00000458499 SBF1O95248 1867 aa18.01■□□□□ 0.47
VGLL4-215ENST00000458499 TCERG1O14776 1098 aaKnown RBP18.01■□□□□ 0.47
VGLL4-215ENST00000458499 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
VGLL4-215ENST00000458499 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
VGLL4-215ENST00000458499 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
VGLL4-215ENST00000458499 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
VGLL4-215ENST00000458499 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
VGLL4-215ENST00000458499 CACNA1SQ13698 1873 aa18■□□□□ 0.47
VGLL4-215ENST00000458499 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
VGLL4-215ENST00000458499 RTKN2Q8IZC4 609 aa17.99■□□□□ 0.47
VGLL4-215ENST00000458499 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
VGLL4-215ENST00000458499 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
VGLL4-215ENST00000458499 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
VGLL4-215ENST00000458499 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
VGLL4-215ENST00000458499 GLTPD2A6NH11 291 aa17.98■□□□□ 0.47
VGLL4-215ENST00000458499 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
VGLL4-215ENST00000458499 FAM89AQ96GI7 184 aa17.98■□□□□ 0.47
VGLL4-215ENST00000458499 MYD88Q99836 296 aa17.98■□□□□ 0.47
VGLL4-215ENST00000458499 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
VGLL4-215ENST00000458499 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
VGLL4-215ENST00000458499 PPEF1O14829 653 aaPredicted RBP17.97■□□□□ 0.47
VGLL4-215ENST00000458499 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
VGLL4-215ENST00000458499 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
VGLL4-215ENST00000458499 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
VGLL4-215ENST00000458499 ABCC4O15439 1325 aa17.97■□□□□ 0.47
VGLL4-215ENST00000458499 TOMM70O94826 608 aa17.96■□□□□ 0.47
VGLL4-215ENST00000458499 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 EXOSC9Q06265 439 aaKnown RBP17.95■□□□□ 0.46
VGLL4-215ENST00000458499 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
VGLL4-215ENST00000458499 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
VGLL4-215ENST00000458499 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 SNED1Q8TER0 1413 aa17.95■□□□□ 0.46
VGLL4-215ENST00000458499 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 VAMP4O75379 141 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
VGLL4-215ENST00000458499 G2E3Q7L622 706 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
VGLL4-215ENST00000458499 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
VGLL4-215ENST00000458499 ZBTB38Q8NAP3 1195 aaPredicted RBP17.93■□□□□ 0.46
VGLL4-215ENST00000458499 PSMD1Q99460 953 aa17.93■□□□□ 0.46
VGLL4-215ENST00000458499 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
VGLL4-215ENST00000458499 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
VGLL4-215ENST00000458499 BBOX1O75936 387 aa17.92■□□□□ 0.46
VGLL4-215ENST00000458499 GRAPQ13588 217 aa17.92■□□□□ 0.46
VGLL4-215ENST00000458499 GRIPAP1Q4V328 841 aa17.92■□□□□ 0.46
VGLL4-215ENST00000458499 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
VGLL4-215ENST00000458499 GRAPLQ8TC17 118 aaPredicted RBP17.92■□□□□ 0.46
VGLL4-215ENST00000458499 TMX4Q9H1E5 349 aaPredicted RBP17.92■□□□□ 0.46
VGLL4-215ENST00000458499 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
VGLL4-215ENST00000458499 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
VGLL4-215ENST00000458499 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 VEGFAP15692 232 aaPredicted RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
VGLL4-215ENST00000458499 POTECB2RU33 542 aa17.9■□□□□ 0.46
VGLL4-215ENST00000458499 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
VGLL4-215ENST00000458499 HSPA6P17066 643 aa17.9■□□□□ 0.46
VGLL4-215ENST00000458499 FLIIQ13045 1269 aa17.9■□□□□ 0.46
VGLL4-215ENST00000458499 ZNF541Q9H0D2 1346 aa17.9■□□□□ 0.46
VGLL4-215ENST00000458499 CCER2I3L3R5 266 aa17.89■□□□□ 0.45
VGLL4-215ENST00000458499 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
VGLL4-215ENST00000458499 NEXNQ0ZGT2 675 aa17.89■□□□□ 0.45
VGLL4-215ENST00000458499 SP8Q8IXZ3 490 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms