RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 F13A1P00488 732 aa24.8■■□□□ 1.56
CRAT-207ENST00000458362 COL9A3Q14050 684 aaPredicted RBP24.8■■□□□ 1.56
CRAT-207ENST00000458362 XAGE3Q8WTP9 111 aa24.8■■□□□ 1.56
CRAT-207ENST00000458362 NOL7Q9UMY1 257 aaKnown RBP24.8■■□□□ 1.56
CRAT-207ENST00000458362 CYP46A1Q9Y6A2 500 aa24.8■■□□□ 1.56
CRAT-207ENST00000458362 CREB3L3Q68CJ9 461 aa24.79■■□□□ 1.56
CRAT-207ENST00000458362 LARP1Q6PKG0 1096 aaKnown RBP24.79■■□□□ 1.56
CRAT-207ENST00000458362 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
CRAT-207ENST00000458362 NPHP3Q7Z494 1330 aa24.79■■□□□ 1.56
CRAT-207ENST00000458362 GJB2P29033 226 aa24.79■■□□□ 1.56
CRAT-207ENST00000458362 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
CRAT-207ENST00000458362 NLRP2Q9NX02 1062 aa24.79■■□□□ 1.56
CRAT-207ENST00000458362 RAPGEF4Q8WZA2 1011 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 BOLA2Q9H3K6 86 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 A0A0D9SFI3 127 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 GCKRQ14397 625 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 MAP4K1Q92918 833 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 MYD88Q99836 296 aa24.78■■□□□ 1.56
CRAT-207ENST00000458362 PHKG2P15735 406 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 TPRNQ4KMQ1 711 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 COPS6Q7L5N1 327 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 MEGF6O75095 1541 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 ME3Q16798 604 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 ZSCAN31Q96LW9 406 aaPredicted RBP24.77■■□□□ 1.56
CRAT-207ENST00000458362 SNRKQ9NRH2 765 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 MTMR6Q9Y217 621 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 MRC1P22897 1456 aa24.77■■□□□ 1.56
CRAT-207ENST00000458362 JARID2Q92833 1246 aaPredicted RBP24.76■■□□□ 1.55
CRAT-207ENST00000458362 ZNF496Q96IT1 587 aaPredicted RBP24.76■■□□□ 1.55
CRAT-207ENST00000458362 SLC27A2O14975 620 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 PIP4K2AP48426 406 aaPredicted RBP24.75■■□□□ 1.55
CRAT-207ENST00000458362 NECAB1Q8N987 351 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 METTL22Q9BUU2 404 aaPredicted RBP24.75■■□□□ 1.55
CRAT-207ENST00000458362 SH2B1Q9NRF2 756 aaPredicted RBP24.75■■□□□ 1.55
CRAT-207ENST00000458362 HIP1O00291 1037 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 OFD1O75665 1012 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 PHF14O94880 888 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 ZKSCAN1P17029 563 aaPredicted RBP24.75■■□□□ 1.55
CRAT-207ENST00000458362 NEXNQ0ZGT2 675 aa24.75■■□□□ 1.55
CRAT-207ENST00000458362 FIBPO43427 364 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 KCNJ4P48050 445 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 LRP10Q7Z4F1 713 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
CRAT-207ENST00000458362 FSD1Q9BTV5 496 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 TPCN1Q9ULQ1 816 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
CRAT-207ENST00000458362 CCDC183Q5T5S1 534 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 USP16Q9Y5T5 823 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 TAF6LQ9Y6J9 622 aa24.74■■□□□ 1.55
CRAT-207ENST00000458362 COL18A1P39060 1754 aa24.73■■□□□ 1.55
CRAT-207ENST00000458362 UBE2HP62256 183 aa24.73■■□□□ 1.55
CRAT-207ENST00000458362 EDC3Q96F86 508 aaKnown RBP24.73■■□□□ 1.55
CRAT-207ENST00000458362 ZKSCAN5Q9Y2L8 839 aa24.73■■□□□ 1.55
CRAT-207ENST00000458362 MED23Q9ULK4 1368 aa24.73■■□□□ 1.55
CRAT-207ENST00000458362 ZNF500O60304 480 aaPredicted RBP24.72■■□□□ 1.55
CRAT-207ENST00000458362 DNM1Q05193 864 aaKnown RBP24.72■■□□□ 1.55
CRAT-207ENST00000458362 CCDC39Q9UFE4 941 aa24.72■■□□□ 1.55
CRAT-207ENST00000458362 AFDNP55196 1824 aaKnown RBP24.71■■□□□ 1.55
CRAT-207ENST00000458362 ZNF589Q86UQ0 364 aaPredicted RBP24.71■■□□□ 1.55
CRAT-207ENST00000458362 RFX5P48382 616 aaPredicted RBP24.7■■□□□ 1.55
CRAT-207ENST00000458362 ATP6V1DQ9Y5K8 247 aa24.7■■□□□ 1.55
CRAT-207ENST00000458362 ANKRD13DQ6ZTN6 518 aa24.7■■□□□ 1.54
CRAT-207ENST00000458362 TCEANC2Q96MN5 208 aa24.7■■□□□ 1.54
CRAT-207ENST00000458362 VPS37CA5D8V6 355 aaPredicted RBP24.69■■□□□ 1.54
CRAT-207ENST00000458362 IFNL2Q8IZJ0 200 aa24.69■■□□□ 1.54
CRAT-207ENST00000458362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.69■■□□□ 1.54
CRAT-207ENST00000458362 JCADQ9P266 1359 aa24.68■■□□□ 1.54
CRAT-207ENST00000458362 CYP27B1O15528 508 aa24.68■■□□□ 1.54
CRAT-207ENST00000458362 CABLES1Q8TDN4 633 aa24.68■■□□□ 1.54
CRAT-207ENST00000458362 COPRSQ9NQ92 184 aa24.68■■□□□ 1.54
CRAT-207ENST00000458362 ARFGEF2Q9Y6D5 1785 aa24.68■■□□□ 1.54
CRAT-207ENST00000458362 SNRPA1P09661 255 aaKnown RBP24.68■■□□□ 1.54
CRAT-207ENST00000458362 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.68■■□□□ 1.54
CRAT-207ENST00000458362 DBNLQ9UJU6 430 aaKnown RBP24.68■■□□□ 1.54
CRAT-207ENST00000458362 PSMA5P28066 241 aa24.67■■□□□ 1.54
CRAT-207ENST00000458362 PTPN12Q05209 780 aaKnown RBP24.67■■□□□ 1.54
CRAT-207ENST00000458362 TFCP2Q12800 502 aa24.67■■□□□ 1.54
CRAT-207ENST00000458362 ABCC6O95255 1503 aa24.67■■□□□ 1.54
CRAT-207ENST00000458362 UBE3BQ7Z3V4 1068 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 COL15A1P39059 1388 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 PLEKHG2Q9H7P9 1386 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 CSB-PGBD3P0DP91 1061 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 RPS6KB1P23443 525 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 CHRNA2Q15822 529 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 TNNI3KQ59H18 835 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 BLOC1S2Q6QNY1 142 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 NDUFB9Q9Y6M9 179 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 FPGT-TNNI3KV9GXZ4 949 aa24.66■■□□□ 1.54
CRAT-207ENST00000458362 TPM2P07951 284 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 TOB2Q14106 344 aaPredicted RBP24.65■■□□□ 1.54
CRAT-207ENST00000458362 ATP5J2-PTCD1G3V325 749 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 PTCD1O75127 700 aaKnown RBP24.65■■□□□ 1.54
CRAT-207ENST00000458362 TAF5LO75529 589 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 MCM5P33992 734 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 TTC5Q8N0Z6 440 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 FAM184AQ8NB25 1140 aa24.65■■□□□ 1.54
CRAT-207ENST00000458362 HCLS1P14317 486 aaPredicted RBP24.64■■□□□ 1.54
CRAT-207ENST00000458362 ATP5JP18859 108 aa24.64■■□□□ 1.54
CRAT-207ENST00000458362 UVSSAQ2YD98 709 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms