RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 STRN4Q9NRL3 753 aa20.17■□□□□ 0.82
CCDC43-202ENST00000457422 HIP1O00291 1037 aa20.17■□□□□ 0.82
CCDC43-202ENST00000457422 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
CCDC43-202ENST00000457422 UBE3BQ7Z3V4 1068 aa20.17■□□□□ 0.82
CCDC43-202ENST00000457422 ARXQ96QS3 562 aa20.17■□□□□ 0.82
CCDC43-202ENST00000457422 CASP7P55210 303 aa20.16■□□□□ 0.82
CCDC43-202ENST00000457422 XRCC6P12956 609 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC43-202ENST00000457422 SNRKQ9NRH2 765 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 TJP1Q07157 1748 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 TOGARAM1Q9Y4F4 1720 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 MRE11P49959 708 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
CCDC43-202ENST00000457422 KCNB2Q92953 911 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 TTC14Q96N46 770 aa20.15■□□□□ 0.82
CCDC43-202ENST00000457422 A0A087WZG4 1122 aa20.14■□□□□ 0.81
CCDC43-202ENST00000457422 PTPN12Q05209 780 aaKnown RBP20.14■□□□□ 0.81
CCDC43-202ENST00000457422 MCTP1Q6DN14 999 aa20.14■□□□□ 0.81
CCDC43-202ENST00000457422 RASEFQ8IZ41 740 aa20.14■□□□□ 0.81
CCDC43-202ENST00000457422 BRD1O95696 1058 aa20.13■□□□□ 0.81
CCDC43-202ENST00000457422 LMBRD1Q9NUN5 540 aa20.13■□□□□ 0.81
CCDC43-202ENST00000457422 EVA1CP58658 441 aa20.12■□□□□ 0.81
CCDC43-202ENST00000457422 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
CCDC43-202ENST00000457422 H7C1W4 665 aa20.12■□□□□ 0.81
CCDC43-202ENST00000457422 PTH1RQ03431 593 aa20.12■□□□□ 0.81
CCDC43-202ENST00000457422 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
CCDC43-202ENST00000457422 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
CCDC43-202ENST00000457422 A1BGP04217 495 aa20.11■□□□□ 0.81
CCDC43-202ENST00000457422 TM6SF1Q9BZW5 370 aa20.11■□□□□ 0.81
CCDC43-202ENST00000457422 BOLA2Q9H3K6 86 aa20.11■□□□□ 0.81
CCDC43-202ENST00000457422 TNNI3KQ59H18 835 aa20.1■□□□□ 0.81
CCDC43-202ENST00000457422 GRPEL1Q9HAV7 217 aa20.1■□□□□ 0.81
CCDC43-202ENST00000457422 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
CCDC43-202ENST00000457422 TFCP2Q12800 502 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 NMIQ13287 307 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-202ENST00000457422 NECTIN1Q15223 517 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 FAM227BQ96M60 508 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 RFX7Q2KHR2 1363 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 ATP5JP18859 108 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 FOXO4P98177 505 aa20.09■□□□□ 0.81
CCDC43-202ENST00000457422 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-202ENST00000457422 JCADQ9P266 1359 aa20.08■□□□□ 0.81
CCDC43-202ENST00000457422 MED23Q9ULK4 1368 aa20.08■□□□□ 0.81
CCDC43-202ENST00000457422 AK2P54819 239 aa20.08■□□□□ 0.81
CCDC43-202ENST00000457422 MAP4K1Q92918 833 aa20.08■□□□□ 0.81
CCDC43-202ENST00000457422 FSD1Q9BTV5 496 aa20.08■□□□□ 0.81
CCDC43-202ENST00000457422 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.81
CCDC43-202ENST00000457422 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
CCDC43-202ENST00000457422 LMBR1LQ6UX01 489 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 LIMCH1Q9UPQ0 1083 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 FOXD4L5Q5VV16 416 aaPredicted RBP20.07■□□□□ 0.8
CCDC43-202ENST00000457422 GAS2L3Q86XJ1 694 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 FOXD4L4Q8WXT5 416 aaPredicted RBP20.07■□□□□ 0.8
CCDC43-202ENST00000457422 ZBTB3Q9H5J0 574 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 ZSWIM6Q9HCJ5 1215 aa20.07■□□□□ 0.8
CCDC43-202ENST00000457422 A0A0D9SFI3 127 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
CCDC43-202ENST00000457422 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
CCDC43-202ENST00000457422 CHAMP1Q96JM3 812 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 TMOD3Q9NYL9 352 aa20.06■□□□□ 0.8
CCDC43-202ENST00000457422 RBM8AQ9Y5S9 174 aaKnown RBP20.06■□□□□ 0.8
CCDC43-202ENST00000457422 CPA1P15085 419 aa20.05■□□□□ 0.8
CCDC43-202ENST00000457422 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
CCDC43-202ENST00000457422 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
CCDC43-202ENST00000457422 COL14A1Q05707 1796 aaKnown RBP20.05■□□□□ 0.8
CCDC43-202ENST00000457422 RPAP1Q9BWH6 1393 aaPredicted RBP20.04■□□□□ 0.8
CCDC43-202ENST00000457422 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
CCDC43-202ENST00000457422 JAKMIP1Q96N16 626 aaKnown RBP20.04■□□□□ 0.8
CCDC43-202ENST00000457422 ITGB4P16144 1822 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 PRPF40AO75400 957 aaKnown RBP20.04■□□□□ 0.8
CCDC43-202ENST00000457422 ZNF445P59923 1031 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 ADCK5Q3MIX3 580 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 GPR108Q9NPR9 543 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
CCDC43-202ENST00000457422 PLCH1Q4KWH8 1693 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 WDR33Q9C0J8 1336 aaKnown RBP20.03■□□□□ 0.8
CCDC43-202ENST00000457422 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
CCDC43-202ENST00000457422 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 DISP2A7MBM2 1401 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 DBNDD2Q9BQY9 259 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
CCDC43-202ENST00000457422 TEX13AQ9BXU3 409 aaPredicted RBP20.03■□□□□ 0.8
CCDC43-202ENST00000457422 ATG3Q9NT62 314 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 PDRG1Q9NUG6 133 aa20.03■□□□□ 0.8
CCDC43-202ENST00000457422 LRP6O75581 1613 aa20.02■□□□□ 0.8
CCDC43-202ENST00000457422 ATG9AQ7Z3C6 839 aa20.02■□□□□ 0.8
CCDC43-202ENST00000457422 ZSCAN31Q96LW9 406 aaPredicted RBP20.02■□□□□ 0.8
CCDC43-202ENST00000457422 HAUS7Q99871 368 aa20.02■□□□□ 0.8
CCDC43-202ENST00000457422 ISCA1Q9BUE6 129 aa20.02■□□□□ 0.8
CCDC43-202ENST00000457422 SLC27A2O14975 620 aa20.01■□□□□ 0.79
CCDC43-202ENST00000457422 KCNJ4P48050 445 aa20.01■□□□□ 0.79
CCDC43-202ENST00000457422 GPT2Q8TD30 523 aa20.01■□□□□ 0.79
CCDC43-202ENST00000457422 SH2B1Q9NRF2 756 aaPredicted RBP20.01■□□□□ 0.79
CCDC43-202ENST00000457422 PSMA5P28066 241 aa20.01■□□□□ 0.79
CCDC43-202ENST00000457422 IL15P40933 162 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms