RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 DDR1Q08345 913 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 GCKRQ14397 625 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 PARP10Q53GL7 1025 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 SETDB2Q96T68 719 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 CWC25Q9NXE8 425 aaPredicted RBP20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
PKNOX1-204ENST00000456957 MYH3P11055 1940 aa20.45■□□□□ 0.86
PKNOX1-204ENST00000456957 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
PKNOX1-204ENST00000456957 MVPQ14764 893 aaKnown RBP20.45■□□□□ 0.86
PKNOX1-204ENST00000456957 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
PKNOX1-204ENST00000456957 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
PKNOX1-204ENST00000456957 MMP10P09238 476 aa20.44■□□□□ 0.86
PKNOX1-204ENST00000456957 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
PKNOX1-204ENST00000456957 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
PKNOX1-204ENST00000456957 TNRC6CQ9HCJ0 1690 aaKnown RBP20.43■□□□□ 0.86
PKNOX1-204ENST00000456957 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
PKNOX1-204ENST00000456957 NTSR2O95665 410 aa20.43■□□□□ 0.86
PKNOX1-204ENST00000456957 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
PKNOX1-204ENST00000456957 PPP1R42Q7Z4L9 355 aa20.42■□□□□ 0.86
PKNOX1-204ENST00000456957 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
PKNOX1-204ENST00000456957 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
PKNOX1-204ENST00000456957 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
PKNOX1-204ENST00000456957 GRM8O00222 908 aa20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 MEIS3Q99687 375 aa20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 TRMT112Q9UI30 125 aaKnown RBP20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
PKNOX1-204ENST00000456957 H7C1W4 665 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 UTYO14607 1347 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 SERPINB2P05120 415 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 NBPF7P0C2Y1 421 aaPredicted RBP20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 ZBTB38Q8NAP3 1195 aaPredicted RBP20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 FAM89AQ96GI7 184 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 DDX19BQ9UMR2 479 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 PARP3Q9Y6F1 533 aa20.4■□□□□ 0.86
PKNOX1-204ENST00000456957 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.86
PKNOX1-204ENST00000456957 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
PKNOX1-204ENST00000456957 CASP7P55210 303 aa20.39■□□□□ 0.85
PKNOX1-204ENST00000456957 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
PKNOX1-204ENST00000456957 NUTM1Q86Y26 1132 aa20.39■□□□□ 0.85
PKNOX1-204ENST00000456957 SYNE4Q8N205 404 aa20.39■□□□□ 0.85
PKNOX1-204ENST00000456957 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 ZBTB7BO15156 539 aaPredicted RBP20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 ERFEQ4G0M1 354 aa20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 PRR5LQ6MZQ0 368 aa20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 TPTE2Q6XPS3 522 aa20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 CNBD1Q8NA66 436 aa20.38■□□□□ 0.85
PKNOX1-204ENST00000456957 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
PKNOX1-204ENST00000456957 SGIP1Q9BQI5 828 aa20.37■□□□□ 0.85
PKNOX1-204ENST00000456957 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
PKNOX1-204ENST00000456957 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
PKNOX1-204ENST00000456957 GNAI3P08754 354 aa20.36■□□□□ 0.85
PKNOX1-204ENST00000456957 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
PKNOX1-204ENST00000456957 NPHP1O15259 732 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 UBTFL1P0CB47 393 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 POLD1P28340 1107 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 PTGER2P43116 358 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 SUCLG2Q96I99 432 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 SPON1Q9HCB6 807 aa20.35■□□□□ 0.85
PKNOX1-204ENST00000456957 KIAA1551Q9HCM1 1747 aa20.34■□□□□ 0.85
PKNOX1-204ENST00000456957 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
PKNOX1-204ENST00000456957 ST5P78524 1137 aa20.34■□□□□ 0.85
PKNOX1-204ENST00000456957 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
PKNOX1-204ENST00000456957 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 SLC10A5Q5PT55 438 aa20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 KAZALD1Q96I82 304 aa20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 CHMP4BQ9H444 224 aaKnown RBP20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 C1orf115Q9H7X2 142 aa20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 ZBTB40Q9NUA8 1239 aa20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.85
PKNOX1-204ENST00000456957 DLEC1Q9Y238 1755 aa20.33■□□□□ 0.84
PKNOX1-204ENST00000456957 DCAF8L1A6NGE4 600 aa20.32■□□□□ 0.84
PKNOX1-204ENST00000456957 PLA2G12BQ9BX93 195 aa20.32■□□□□ 0.84
PKNOX1-204ENST00000456957 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
PKNOX1-204ENST00000456957 GNAI2P04899 355 aa20.31■□□□□ 0.84
PKNOX1-204ENST00000456957 NEFLP07196 543 aa20.31■□□□□ 0.84
PKNOX1-204ENST00000456957 FOXO4P98177 505 aa20.31■□□□□ 0.84
PKNOX1-204ENST00000456957 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
PKNOX1-204ENST00000456957 SPEF2Q9C093 1822 aa20.31■□□□□ 0.84
PKNOX1-204ENST00000456957 TAF1P21675 1872 aa20.3■□□□□ 0.84
PKNOX1-204ENST00000456957 PDE8AO60658 829 aa20.3■□□□□ 0.84
PKNOX1-204ENST00000456957 C3orf67Q6ZVT6 689 aa20.3■□□□□ 0.84
PKNOX1-204ENST00000456957 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
PKNOX1-204ENST00000456957 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
PKNOX1-204ENST00000456957 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
PKNOX1-204ENST00000456957 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
PKNOX1-204ENST00000456957 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
PKNOX1-204ENST00000456957 CTSWP56202 376 aa20.28■□□□□ 0.84
PKNOX1-204ENST00000456957 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
PKNOX1-204ENST00000456957 COL4A1P02462 1669 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms