RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 ZNF428Q96B54 188 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 ISCA1Q9BUE6 129 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 LAMB2P55268 1798 aa10.9□□□□□ -0.67
SP140-207ENST00000456542 ABCC12Q96J65 1359 aa10.9□□□□□ -0.67
SP140-207ENST00000456542 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 TCERG1O14776 1098 aaKnown RBP10.89□□□□□ -0.67
SP140-207ENST00000456542 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
SP140-207ENST00000456542 SRGNP10124 158 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 HNRNPUQ00839 825 aaKnown RBP eCLIP10.89□□□□□ -0.67
SP140-207ENST00000456542 FLIIQ13045 1269 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
SP140-207ENST00000456542 KSR2Q6VAB6 950 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 METTL22Q9BUU2 404 aaPredicted RBP10.89□□□□□ -0.67
SP140-207ENST00000456542 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
SP140-207ENST00000456542 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
SP140-207ENST00000456542 CRY2Q49AN0 593 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 STYK1Q6J9G0 422 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 G2E3Q7L622 706 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 DDX60Q8IY21 1712 aaKnown RBP10.88□□□□□ -0.67
SP140-207ENST00000456542 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 WWC3Q9ULE0 1092 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 ADCY9O60503 1353 aa10.88□□□□□ -0.67
SP140-207ENST00000456542 SH3TC1Q8TE82 1336 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 PI4KAP2A4QPH2 592 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 SLC10A5Q5PT55 438 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 PI4KAP1Q8N8J0 262 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 CCDC191Q8NCU4 936 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
SP140-207ENST00000456542 MAP3K2Q9Y2U5 619 aa10.87□□□□□ -0.67
SP140-207ENST00000456542 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 ATP5J2-PTCD1G3V325 749 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 NPR1P16066 1061 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 FKBP5Q13451 457 aaPredicted RBP10.86□□□□□ -0.67
SP140-207ENST00000456542 ZNF622Q969S3 477 aaKnown RBP eCLIP10.86□□□□□ -0.67
SP140-207ENST00000456542 MYD88Q99836 296 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 SBF1O95248 1867 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 MYH3P11055 1940 aa10.86□□□□□ -0.67
SP140-207ENST00000456542 ALDH1B1P30837 517 aa10.85□□□□□ -0.67
SP140-207ENST00000456542 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
SP140-207ENST00000456542 ALDH1L2Q3SY69 923 aa10.85□□□□□ -0.67
SP140-207ENST00000456542 DNAAF4Q8WXU2 420 aa10.85□□□□□ -0.67
SP140-207ENST00000456542 NLRP3Q96P20 1036 aa10.85□□□□□ -0.67
SP140-207ENST00000456542 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
SP140-207ENST00000456542 PCCAP05165 728 aaPredicted RBP10.84□□□□□ -0.67
SP140-207ENST00000456542 IGKV5-2P06315 115 aa10.84□□□□□ -0.67
SP140-207ENST00000456542 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
SP140-207ENST00000456542 PRPF40BQ6NWY9 871 aaKnown RBP10.84□□□□□ -0.67
SP140-207ENST00000456542 ZBTB38Q8NAP3 1195 aaPredicted RBP10.84□□□□□ -0.67
SP140-207ENST00000456542 SSH1Q8WYL5 1049 aa10.84□□□□□ -0.67
SP140-207ENST00000456542 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
SP140-207ENST00000456542 CCDC88AQ3V6T2 1871 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 NEURL1BA8MQ27 555 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.68
SP140-207ENST00000456542 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 SYNE4Q8N205 404 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
SP140-207ENST00000456542 LINS1Q8NG48 757 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 PTPRCP08575 1304 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 CDHR2Q9BYE9 1310 aa10.83□□□□□ -0.68
SP140-207ENST00000456542 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 YY1P25490 414 aa10.82□□□□□ -0.68
SP140-207ENST00000456542 CWF19L2Q2TBE0 894 aaKnown RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 ARHGAP27Q6ZUM4 889 aa10.82□□□□□ -0.68
SP140-207ENST00000456542 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
SP140-207ENST00000456542 C7orf43Q8WVR3 580 aa10.82□□□□□ -0.68
SP140-207ENST00000456542 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 GOLGB1Q14789 3259 aaKnown RBP10.82□□□□□ -0.68
SP140-207ENST00000456542 UTRNP46939 3433 aa10.82□□□□□ -0.68
SP140-207ENST00000456542 TAF1P21675 1872 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 F6X3S4 739 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 C21orf2O43822 256 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
SP140-207ENST00000456542 GCKRQ14397 625 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 SF3B3Q15393 1217 aaKnown RBP10.81□□□□□ -0.68
SP140-207ENST00000456542 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 LTBP3Q9NS15 1303 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 LRRC37AA6NMS7 1700 aa10.81□□□□□ -0.68
SP140-207ENST00000456542 H7C1W4 665 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 PDE8AO60658 829 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 RARSP54136 660 aaKnown RBP10.8□□□□□ -0.68
SP140-207ENST00000456542 CCDC93Q567U6 631 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 RTL5Q5HYW3 569 aaPredicted RBP10.8□□□□□ -0.68
SP140-207ENST00000456542 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms