RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 NOLC1Q14978 699 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 ZCRB1Q8TBF4 217 aaKnown RBP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 GCC1Q96CN9 775 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 MEIS3Q99687 375 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 MRC1P22897 1456 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 C5P01031 1676 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 IL2RBP14784 551 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 NOP2P46087 812 aaKnown RBP9.16□□□□□ -0.94
HDAC9-218ENST00000456174 NUCB1Q02818 461 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 SLC39A6Q13433 755 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 CTR9Q6PD62 1173 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 CEP120Q8N960 986 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 PCDH11XQ9BZA7 1347 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 BAG4O95429 457 aaKnown RBP9.16□□□□□ -0.94
HDAC9-218ENST00000456174 RPAP2Q8IXW5 612 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-218ENST00000456174 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 DBF4Q9UBU7 674 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-218ENST00000456174 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
HDAC9-218ENST00000456174 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.94
HDAC9-218ENST00000456174 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.94
HDAC9-218ENST00000456174 ANKRD44Q8N8A2 993 aa9.15□□□□□ -0.94
HDAC9-218ENST00000456174 COL16A1Q07092 1604 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-218ENST00000456174 ANXA1P04083 346 aa9.15□□□□□ -0.95
HDAC9-218ENST00000456174 CABP4P57796 275 aa9.15□□□□□ -0.95
HDAC9-218ENST00000456174 CHD1LQ86WJ1 897 aa9.15□□□□□ -0.95
HDAC9-218ENST00000456174 MYCBPQ99417 103 aaPredicted RBP9.15□□□□□ -0.95
HDAC9-218ENST00000456174 RAD50Q92878 1312 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 LOC102724159A0A0B4J2E5 919 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 PWP2Q15269 919 aaKnown RBP9.14□□□□□ -0.95
HDAC9-218ENST00000456174 ANKRD45Q5TZF3 282 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 CEP85Q6P2H3 762 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 TTC5Q8N0Z6 440 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 ZBTB9Q96C00 473 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 NCAPGQ9BPX3 1015 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 LNPKQ9C0E8 428 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 FAM53CQ9NYF3 392 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 PHF14O94880 888 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 GNAI3P08754 354 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
HDAC9-218ENST00000456174 DCTPP1Q9H773 170 aa9.14□□□□□ -0.95
HDAC9-218ENST00000456174 PI4KAP2A4QPH2 592 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 GNAI2P04899 355 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 SSFA2P28290 1259 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 PROSER3Q2NL68 480 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
HDAC9-218ENST00000456174 PI4KAP1Q8N8J0 262 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-218ENST00000456174 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
HDAC9-218ENST00000456174 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-218ENST00000456174 KRT222Q8N1A0 295 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 DNAAF4Q8WXU2 420 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 LMBRD1Q9NUN5 540 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
HDAC9-218ENST00000456174 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 ERVV-2B6SEH9 535 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 TOM1O60784 492 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 HMMRO75330 724 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 PIP4K2BP78356 416 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
HDAC9-218ENST00000456174 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 USP44Q9H0E7 712 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 DDX21Q9NR30 783 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC9-218ENST00000456174 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 ADCY9O60503 1353 aa9.12□□□□□ -0.95
HDAC9-218ENST00000456174 WNK3Q9BYP7 1800 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 SNRPA1P09661 255 aaKnown RBP9.11□□□□□ -0.95
HDAC9-218ENST00000456174 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 GTF2A1P52655 376 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-218ENST00000456174 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 PAPPAQ13219 1627 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-218ENST00000456174 DHX16O60231 1041 aaKnown RBP9.11□□□□□ -0.95
HDAC9-218ENST00000456174 CHAF1AQ13111 956 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-218ENST00000456174 PDIA6Q15084 440 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 BEND3Q5T5X7 828 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 ICE2Q659A1 982 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 KIF18AQ8NI77 898 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 GLI3P10071 1580 aa9.11□□□□□ -0.95
HDAC9-218ENST00000456174 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-218ENST00000456174 CYP2C19P33261 490 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 KSR2Q6VAB6 950 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 RSPH14Q9UHP6 348 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 MAP3K2Q9Y2U5 619 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
HDAC9-218ENST00000456174 ITGB4P16144 1822 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 REC8O95072 547 aa9.1□□□□□ -0.95
HDAC9-218ENST00000456174 ADAMTS2O95450 1211 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms