RNA–Protein interactions for RNA: ENST00000456095.6

PUF60-204, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5 BASIC

Gene PUF60, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-204ENST00000456095 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
PUF60-204ENST00000456095 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
PUF60-204ENST00000456095 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
PUF60-204ENST00000456095 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
PUF60-204ENST00000456095 SBF1O95248 1867 aa16.54■□□□□ 0.24
PUF60-204ENST00000456095 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
PUF60-204ENST00000456095 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
PUF60-204ENST00000456095 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
PUF60-204ENST00000456095 NFKBIEO00221 500 aa16.53■□□□□ 0.24
PUF60-204ENST00000456095 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
PUF60-204ENST00000456095 NTSR2O95665 410 aa16.52■□□□□ 0.24
PUF60-204ENST00000456095 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
PUF60-204ENST00000456095 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
PUF60-204ENST00000456095 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
PUF60-204ENST00000456095 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.24
PUF60-204ENST00000456095 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.23
PUF60-204ENST00000456095 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.23
PUF60-204ENST00000456095 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.23
PUF60-204ENST00000456095 SLX4Q8IY92 1834 aa16.51■□□□□ 0.23
PUF60-204ENST00000456095 KIF3CO14782 793 aa16.51■□□□□ 0.23
PUF60-204ENST00000456095 PRELPP51888 382 aa16.51■□□□□ 0.23
PUF60-204ENST00000456095 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
PUF60-204ENST00000456095 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 CCDC30Q5VVM6 783 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
PUF60-204ENST00000456095 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
PUF60-204ENST00000456095 TAOK3Q9H2K8 898 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
PUF60-204ENST00000456095 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
PUF60-204ENST00000456095 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
PUF60-204ENST00000456095 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
PUF60-204ENST00000456095 VAMP4O75379 141 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
PUF60-204ENST00000456095 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 GLTPD2A6NH11 291 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
PUF60-204ENST00000456095 TRMT112Q9UI30 125 aaKnown RBP16.48■□□□□ 0.23
PUF60-204ENST00000456095 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
PUF60-204ENST00000456095 TOMM70O94826 608 aa16.47■□□□□ 0.23
PUF60-204ENST00000456095 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
PUF60-204ENST00000456095 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
PUF60-204ENST00000456095 FER1L6Q2WGJ9 1857 aa16.47■□□□□ 0.23
PUF60-204ENST00000456095 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
PUF60-204ENST00000456095 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
PUF60-204ENST00000456095 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.224e-12■■■■□ 23.5
PUF60-204ENST00000456095 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
PUF60-204ENST00000456095 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
PUF60-204ENST00000456095 CACNA1SQ13698 1873 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
PUF60-204ENST00000456095 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
PUF60-204ENST00000456095 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
PUF60-204ENST00000456095 HCLS1P14317 486 aaPredicted RBP16.44■□□□□ 0.22
PUF60-204ENST00000456095 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
PUF60-204ENST00000456095 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
PUF60-204ENST00000456095 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
PUF60-204ENST00000456095 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
PUF60-204ENST00000456095 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
PUF60-204ENST00000456095 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
PUF60-204ENST00000456095 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
PUF60-204ENST00000456095 TNRC6CQ9HCJ0 1690 aaKnown RBP16.42■□□□□ 0.22
PUF60-204ENST00000456095 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
PUF60-204ENST00000456095 BBOX1O75936 387 aa16.42■□□□□ 0.22
PUF60-204ENST00000456095 RBM46Q8TBY0 533 aaKnown RBP16.42■□□□□ 0.22
PUF60-204ENST00000456095 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
PUF60-204ENST00000456095 PSMD1Q99460 953 aa16.42■□□□□ 0.22
PUF60-204ENST00000456095 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
PUF60-204ENST00000456095 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
PUF60-204ENST00000456095 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
PUF60-204ENST00000456095 HSPA6P17066 643 aa16.41■□□□□ 0.22
PUF60-204ENST00000456095 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
PUF60-204ENST00000456095 G2E3Q7L622 706 aa16.4■□□□□ 0.22
PUF60-204ENST00000456095 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
PUF60-204ENST00000456095 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
PUF60-204ENST00000456095 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
PUF60-204ENST00000456095 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
PUF60-204ENST00000456095 FKBP5Q13451 457 aaPredicted RBP16.39■□□□□ 0.21
PUF60-204ENST00000456095 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
PUF60-204ENST00000456095 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
PUF60-204ENST00000456095 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
PUF60-204ENST00000456095 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
PUF60-204ENST00000456095 MYD88Q99836 296 aa16.39■□□□□ 0.21
PUF60-204ENST00000456095 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
PUF60-204ENST00000456095 ABCC4O15439 1325 aa16.38■□□□□ 0.21
PUF60-204ENST00000456095 DDNO94850 711 aaPredicted RBP16.38■□□□□ 0.21
PUF60-204ENST00000456095 FSTL1Q12841 308 aa16.38■□□□□ 0.21
PUF60-204ENST00000456095 FLIIQ13045 1269 aa16.38■□□□□ 0.21
PUF60-204ENST00000456095 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
PUF60-204ENST00000456095 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
PUF60-204ENST00000456095 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms