RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 UTP14AQ9BVJ6 771 aaKnown RBP22.98■■□□□ 1.27
COL13A1-206ENST00000456019 TOMM70O94826 608 aa22.97■■□□□ 1.27
COL13A1-206ENST00000456019 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
COL13A1-206ENST00000456019 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
COL13A1-206ENST00000456019 GLTPD2A6NH11 291 aa22.96■■□□□ 1.27
COL13A1-206ENST00000456019 TCIRG1Q13488 830 aa22.96■■□□□ 1.27
COL13A1-206ENST00000456019 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
COL13A1-206ENST00000456019 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
COL13A1-206ENST00000456019 CCDC27Q2M243 656 aa22.95■■□□□ 1.26
COL13A1-206ENST00000456019 CCDC88AQ3V6T2 1871 aa22.95■■□□□ 1.26
COL13A1-206ENST00000456019 C16orf71Q8IYS4 520 aaPredicted RBP22.95■■□□□ 1.26
COL13A1-206ENST00000456019 PLBD2Q8NHP8 589 aa22.95■■□□□ 1.26
COL13A1-206ENST00000456019 RRAGCQ9HB90 399 aa22.95■■□□□ 1.26
COL13A1-206ENST00000456019 HOXA10P31260 410 aaPredicted RBP22.94■■□□□ 1.26
COL13A1-206ENST00000456019 NLRP10Q86W26 655 aa22.94■■□□□ 1.26
COL13A1-206ENST00000456019 RTKN2Q8IZC4 609 aa22.94■■□□□ 1.26
COL13A1-206ENST00000456019 NLRP3Q96P20 1036 aa22.94■■□□□ 1.26
COL13A1-206ENST00000456019 ANKRD36CQ5JPF3 1778 aa22.94■■□□□ 1.26
COL13A1-206ENST00000456019 HSPA6P17066 643 aa22.93■■□□□ 1.26
COL13A1-206ENST00000456019 SLC10A5Q5PT55 438 aa22.93■■□□□ 1.26
COL13A1-206ENST00000456019 ANKRD13DQ6ZTN6 518 aa22.93■■□□□ 1.26
COL13A1-206ENST00000456019 RBM17Q96I25 401 aaKnown RBP22.93■■□□□ 1.26
COL13A1-206ENST00000456019 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-206ENST00000456019 FKBP4Q02790 459 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL13A1-206ENST00000456019 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
COL13A1-206ENST00000456019 DPY19L2Q6NUT2 758 aa22.92■■□□□ 1.26
COL13A1-206ENST00000456019 CHMP4AQ9BY43 222 aa22.92■■□□□ 1.26
COL13A1-206ENST00000456019 DICER1Q9UPY3 1922 aaKnown RBP22.91■■□□□ 1.26
COL13A1-206ENST00000456019 OLFM4Q6UX06 510 aa22.91■■□□□ 1.26
COL13A1-206ENST00000456019 WWC1Q8IX03 1113 aa22.91■■□□□ 1.26
COL13A1-206ENST00000456019 C8orf58Q8NAV2 365 aa22.91■■□□□ 1.26
COL13A1-206ENST00000456019 RBM46Q8TBY0 533 aaKnown RBP22.91■■□□□ 1.26
COL13A1-206ENST00000456019 CRAMP1Q96RY5 1269 aa22.91■■□□□ 1.26
COL13A1-206ENST00000456019 CC2D2BQ6DHV5 1058 aa22.9■■□□□ 1.26
COL13A1-206ENST00000456019 C3orf67Q6ZVT6 689 aa22.9■■□□□ 1.26
COL13A1-206ENST00000456019 TRMT112Q9UI30 125 aaKnown RBP22.9■■□□□ 1.26
COL13A1-206ENST00000456019 SH3TC1Q8TE82 1336 aa22.89■■□□□ 1.26
COL13A1-206ENST00000456019 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
COL13A1-206ENST00000456019 IL16Q14005 1332 aa22.87■■□□□ 1.25
COL13A1-206ENST00000456019 GOLGA2Q08379 1002 aa22.87■■□□□ 1.25
COL13A1-206ENST00000456019 GRIPAP1Q4V328 841 aa22.87■■□□□ 1.25
COL13A1-206ENST00000456019 CCDC30Q5VVM6 783 aa22.87■■□□□ 1.25
COL13A1-206ENST00000456019 TSR2Q969E8 191 aaKnown RBP22.87■■□□□ 1.25
COL13A1-206ENST00000456019 ISCA1Q9BUE6 129 aa22.87■■□□□ 1.25
COL13A1-206ENST00000456019 ZNF277Q9NRM2 450 aaPredicted RBP22.87■■□□□ 1.25
COL13A1-206ENST00000456019 PPEF1O14829 653 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-206ENST00000456019 HCLS1P14317 486 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-206ENST00000456019 FSTL1Q12841 308 aa22.86■■□□□ 1.25
COL13A1-206ENST00000456019 SYNE4Q8N205 404 aa22.86■■□□□ 1.25
COL13A1-206ENST00000456019 PSMD1Q99460 953 aa22.86■■□□□ 1.25
COL13A1-206ENST00000456019 SNED1Q8TER0 1413 aa22.85■■□□□ 1.25
COL13A1-206ENST00000456019 RIC3Q7Z5B4 369 aa22.85■■□□□ 1.25
COL13A1-206ENST00000456019 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
COL13A1-206ENST00000456019 PHAXQ9H814 394 aaKnown RBP22.85■■□□□ 1.25
COL13A1-206ENST00000456019 WDR90Q96KV7 1748 aa22.85■■□□□ 1.25
COL13A1-206ENST00000456019 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
COL13A1-206ENST00000456019 IARSP41252 1262 aaKnown RBP22.84■■□□□ 1.25
COL13A1-206ENST00000456019 TRIM28Q13263 835 aaKnown RBP22.84■■□□□ 1.25
COL13A1-206ENST00000456019 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-206ENST00000456019 ABCC4O15439 1325 aa22.82■■□□□ 1.24
COL13A1-206ENST00000456019 POTECB2RU33 542 aa22.82■■□□□ 1.24
COL13A1-206ENST00000456019 TCERG1O14776 1098 aaKnown RBP22.82■■□□□ 1.24
COL13A1-206ENST00000456019 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-206ENST00000456019 APLP1P51693 650 aa22.82■■□□□ 1.24
COL13A1-206ENST00000456019 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
COL13A1-206ENST00000456019 DDX58O95786 925 aaKnown RBP22.81■■□□□ 1.24
COL13A1-206ENST00000456019 DDX46Q7L014 1031 aaKnown RBP22.81■■□□□ 1.24
COL13A1-206ENST00000456019 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 ZNF428Q96B54 188 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 FAM89AQ96GI7 184 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 STK31Q9BXU1 1019 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 ATP6V0A2Q9Y487 856 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 LAMB2P55268 1798 aa22.81■■□□□ 1.24
COL13A1-206ENST00000456019 BBOX1O75936 387 aa22.8■■□□□ 1.24
COL13A1-206ENST00000456019 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-206ENST00000456019 FAM9BQ8IZU0 186 aa22.8■■□□□ 1.24
COL13A1-206ENST00000456019 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-206ENST00000456019 CEP350Q5VT06 3117 aa22.8■■□□□ 1.24
COL13A1-206ENST00000456019 JDP2Q8WYK2 163 aa22.79■■□□□ 1.24
COL13A1-206ENST00000456019 FZD9O00144 591 aa22.78■■□□□ 1.24
COL13A1-206ENST00000456019 GRAPQ13588 217 aa22.78■■□□□ 1.24
COL13A1-206ENST00000456019 GRAPLQ8TC17 118 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-206ENST00000456019 MYD88Q99836 296 aa22.78■■□□□ 1.24
COL13A1-206ENST00000456019 DDX60Q8IY21 1712 aaKnown RBP22.77■■□□□ 1.24
COL13A1-206ENST00000456019 IQCA1LA6NCM1 817 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 SLC51AQ86UW1 340 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 SP8Q8IXZ3 490 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 ZBTB38Q8NAP3 1195 aaPredicted RBP22.77■■□□□ 1.24
COL13A1-206ENST00000456019 CCDC191Q8NCU4 936 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 L3MBTL3Q96JM7 780 aaPredicted RBP22.77■■□□□ 1.24
COL13A1-206ENST00000456019 ZNF541Q9H0D2 1346 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 FANCIQ9NVI1 1328 aa22.77■■□□□ 1.24
COL13A1-206ENST00000456019 IRS4O14654 1257 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-206ENST00000456019 HSP90B1P14625 803 aaKnown RBP22.76■■□□□ 1.23
COL13A1-206ENST00000456019 SF3B3Q15393 1217 aaKnown RBP22.76■■□□□ 1.23
COL13A1-206ENST00000456019 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-206ENST00000456019 TMC4Q7Z404 712 aa22.76■■□□□ 1.23
COL13A1-206ENST00000456019 METTL22Q9BUU2 404 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-206ENST00000456019 LARGE2Q8N3Y3 721 aa22.75■■□□□ 1.23
COL13A1-206ENST00000456019 SUPT20HQ8NEM7 779 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms