RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MYH13Q9UKX3 1938 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 KRT18P05783 430 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 TAF7Q15545 349 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 TOMM22Q9NS69 142 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 ZFYVE9O95405 1425 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 LACTBP83111 547 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 FKBP5Q13451 457 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 NBPF11Q86T75 865 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 SIN3AQ96ST3 1273 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 RPRD2Q5VT52 1461 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 NCOR1O75376 2440 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 ZNF189O75820 626 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 SNW1Q13573 536 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CNGA4Q8IV77 575 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 PRXQ9BXM0 1461 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 KRT86O43790 486 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 FCHSD2O94868 740 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 NEK4P51957 841 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 FAM200AQ8TCP9 573 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CALR3Q96L12 384 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 TTC21BQ7Z4L5 1316 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 IFT140Q96RY7 1462 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 TOP1P11387 765 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 SNX16P57768 344 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 AFAP1L2Q8N4X5 818 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 PANK3Q9H999 370 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 PPP1R12CQ9BZL4 782 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CWC25Q9NXE8 425 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 FAN1Q9Y2M0 1017 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 APBA1Q02410 837 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 PPP4R3AQ6IN85 833 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 EVPLQ92817 2033 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CYLC1P35663 651 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 HDXQ7Z353 690 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 OGFRQ9NZT2 677 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 ERBINQ96RT1 1412 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 MACROD2A1Z1Q3 448 aa5.96□□□□□ -1.45
CSMD3-204ENST00000455883 IMPACTQ9P2X3 320 aa5.96□□□□□ -1.45
CSMD3-204ENST00000455883 ANAPC4Q9UJX5 808 aa5.96□□□□□ -1.45
CSMD3-204ENST00000455883 TTF1Q15361 905 aaPredicted RBP5.96□□□□□ -1.45
CSMD3-204ENST00000455883 ATP8B1O43520 1251 aa5.96□□□□□ -1.45
CSMD3-204ENST00000455883 APBB1IPQ7Z5R6 666 aaPredicted RBP5.96□□□□□ -1.45
CSMD3-204ENST00000455883 KIF20BQ96Q89 1820 aa5.96□□□□□ -1.45
CSMD3-204ENST00000455883 HSF2BPO75031 334 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 APLFQ8IW19 511 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 SSH2Q76I76 1423 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 BICDL2A1A5D9 508 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 CFAP100Q494V2 611 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 MRVI1Q9Y6F6 885 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 NPC1L1Q9UHC9 1359 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 SETDB1Q15047 1291 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 RUFY4Q6ZNE9 571 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 PDILTQ8N807 584 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 TRIML1Q8N9V2 468 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 NCAPGQ9BPX3 1015 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 TRIM7Q9C029 511 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 Q9H521 79 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 SLC4A10Q6U841 1118 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 MPNDQ8N594 471 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 NGDNQ8NEJ9 315 aaKnown RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 RAB3IPQ96QF0 476 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 IQCGQ9H095 443 aaKnown RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 CLASP1Q7Z460 1538 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 GBP7Q8N8V2 638 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 PPP1R2P3Q6NXS1 205 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 SPRYD3Q8NCJ5 442 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 GTF2A1P52655 376 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-204ENST00000455883 SEPT2Q15019 361 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC27Q2M243 656 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 CAPZA3Q96KX2 299 aa5.96□□□□□ -1.46
CSMD3-204ENST00000455883 PTPRGP23470 1445 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 RPAINQ86UA6 219 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 LRRFIP2Q9Y608 721 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SEC16AO15027 2179 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 CROCC2H7BZ55 1655 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 RBBP5Q15291 538 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 GPR161Q8N6U8 529 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SBNO1A3KN83 1393 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 FBF1Q8TES7 1133 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 PLCB1Q9NQ66 1216 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SAMD15Q9P1V8 674 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 MTRF1LQ9UGC7 380 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 A0A1B0GUL7 405 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 RIPK4P57078 832 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 VWA3BQ502W6 1294 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 ERMNQ8TAM6 284 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 TPCN1Q9ULQ1 816 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 TRIM37O94972 964 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SLU7O95391 586 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 ERCC3P19447 782 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 RNASELQ05823 741 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 KIF1BPQ96EK5 621 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 AOX1Q06278 1338 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 NCOA1Q15788 1441 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 APC2O95996 2303 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 HAUS8Q9BT25 410 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 PBRM1Q86U86 1689 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms