RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GNAI3P08754 354 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 TM4SF1P30408 202 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 FKBP8Q14318 412 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 SOCS7O14512 581 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-206ENST00000454852 CASP7P55210 303 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 TBC1D9BQ66K14 1250 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAF4-206ENST00000454852 CARMIL3Q8ND23 1372 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
TRAF4-206ENST00000454852 CDHR2Q9BYE9 1310 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 NFIXQ14938 502 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-206ENST00000454852 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 MEIS3Q99687 375 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 LAMB2P55268 1798 aa14.17□□□□□ -0.14
TRAF4-206ENST00000454852 NTSR2O95665 410 aa14.16□□□□□ -0.14
TRAF4-206ENST00000454852 NBPF7P0C2Y1 421 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-206ENST00000454852 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
TRAF4-206ENST00000454852 PPP1R42Q7Z4L9 355 aa14.16□□□□□ -0.14
TRAF4-206ENST00000454852 EXOC6Q8TAG9 804 aa14.16□□□□□ -0.14
TRAF4-206ENST00000454852 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
TRAF4-206ENST00000454852 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-206ENST00000454852 GPTP24298 496 aa14.15□□□□□ -0.14
TRAF4-206ENST00000454852 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
TRAF4-206ENST00000454852 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
TRAF4-206ENST00000454852 NYXQ9GZU5 481 aa14.15□□□□□ -0.14
TRAF4-206ENST00000454852 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
TRAF4-206ENST00000454852 GNAI2P04899 355 aa14.14□□□□□ -0.15
TRAF4-206ENST00000454852 UBTFL1P0CB47 393 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-206ENST00000454852 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
TRAF4-206ENST00000454852 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-206ENST00000454852 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
TRAF4-206ENST00000454852 DDR1Q08345 913 aa14.13□□□□□ -0.15
TRAF4-206ENST00000454852 MTX1Q13505 466 aa14.13□□□□□ -0.15
TRAF4-206ENST00000454852 RABL6Q3YEC7 729 aaPredicted RBP14.13□□□□□ -0.15
TRAF4-206ENST00000454852 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
TRAF4-206ENST00000454852 UBE3BQ7Z3V4 1068 aa14.13□□□□□ -0.15
TRAF4-206ENST00000454852 KAZALD1Q96I82 304 aa14.13□□□□□ -0.15
TRAF4-206ENST00000454852 TRMT112Q9UI30 125 aaKnown RBP14.13□□□□□ -0.15
TRAF4-206ENST00000454852 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
TRAF4-206ENST00000454852 MSH5O43196 834 aa14.12□□□□□ -0.15
TRAF4-206ENST00000454852 R3HDM1Q15032 1099 aaKnown RBP14.12□□□□□ -0.15
TRAF4-206ENST00000454852 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-206ENST00000454852 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-206ENST00000454852 MTFR1LQ9H019 292 aa14.12□□□□□ -0.15
TRAF4-206ENST00000454852 SERPINB2P05120 415 aa14.11□□□□□ -0.15
TRAF4-206ENST00000454852 BICDL1Q6ZP65 573 aa14.11□□□□□ -0.15
TRAF4-206ENST00000454852 NBPF5PQ86XG9 351 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-206ENST00000454852 FAM89AQ96GI7 184 aa14.11□□□□□ -0.15
TRAF4-206ENST00000454852 SUCLG2Q96I99 432 aa14.11□□□□□ -0.15
TRAF4-206ENST00000454852 LRRFIP2Q9Y608 721 aaKnown RBP14.11□□□□□ -0.15
TRAF4-206ENST00000454852 MYH3P11055 1940 aa14.1□□□□□ -0.15
TRAF4-206ENST00000454852 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-206ENST00000454852 CSF1RP07333 972 aa14.1□□□□□ -0.15
TRAF4-206ENST00000454852 MMP10P09238 476 aa14.1□□□□□ -0.15
TRAF4-206ENST00000454852 FOXO4P98177 505 aa14.1□□□□□ -0.15
TRAF4-206ENST00000454852 PRR5LQ6MZQ0 368 aa14.1□□□□□ -0.15
TRAF4-206ENST00000454852 RTL9Q8NET4 1388 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 KLRG2A4D1S0 409 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-206ENST00000454852 PDE8AO60658 829 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 CEP85Q6P2H3 762 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 ANKRD44Q8N8A2 993 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 CNBD1Q8NA66 436 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 PARP3Q9Y6F1 533 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
TRAF4-206ENST00000454852 ATP8B2P98198 1209 aa14.08□□□□□ -0.16
TRAF4-206ENST00000454852 SF3B3Q15393 1217 aaKnown RBP14.08□□□□□ -0.16
TRAF4-206ENST00000454852 ERFEQ4G0M1 354 aa14.08□□□□□ -0.16
TRAF4-206ENST00000454852 EPHA10Q5JZY3 1008 aa14.08□□□□□ -0.16
TRAF4-206ENST00000454852 SYNE4Q8N205 404 aa14.08□□□□□ -0.16
TRAF4-206ENST00000454852 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
TRAF4-206ENST00000454852 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
TRAF4-206ENST00000454852 CTSWP56202 376 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 ST5P78524 1137 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-206ENST00000454852 POLA2Q14181 598 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 NUTM1Q86Y26 1132 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 SIRT2Q8IXJ6 389 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 TTLL11Q8NHH1 800 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 SSH3Q8TE77 659 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
TRAF4-206ENST00000454852 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
TRAF4-206ENST00000454852 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
TRAF4-206ENST00000454852 ANKRD31Q8N7Z5 1873 aa14.06□□□□□ -0.16
TRAF4-206ENST00000454852 GTF2E1P29083 439 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-206ENST00000454852 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
TRAF4-206ENST00000454852 JARID2Q92833 1246 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-206ENST00000454852 BRIP1Q9BX63 1249 aa14.06□□□□□ -0.16
TRAF4-206ENST00000454852 PPP4R2Q9NY27 417 aa14.06□□□□□ -0.16
TRAF4-206ENST00000454852 PSDA5PKW4 1024 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-206ENST00000454852 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
TRAF4-206ENST00000454852 HMMRO75330 724 aa14.05□□□□□ -0.16
TRAF4-206ENST00000454852 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms