RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 FAM107BQ9H098 131 aa9□□□□□ -0.97
RIF1-206ENST00000453091 ABCC11Q96J66 1382 aa9□□□□□ -0.97
RIF1-206ENST00000453091 EIF3JO75822 258 aaKnown RBP9□□□□□ -0.97
RIF1-206ENST00000453091 STX1AQ16623 288 aa9□□□□□ -0.97
RIF1-206ENST00000453091 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
RIF1-206ENST00000453091 CCDC113Q9H0I3 377 aa9□□□□□ -0.97
RIF1-206ENST00000453091 POLKQ9UBT6 870 aa9□□□□□ -0.97
RIF1-206ENST00000453091 CHMP4BP1P59074 171 aa9□□□□□ -0.97
RIF1-206ENST00000453091 SNX21Q969T3 373 aa9□□□□□ -0.97
RIF1-206ENST00000453091 IQGAP2Q13576 1575 aa9□□□□□ -0.97
RIF1-206ENST00000453091 RNF187Q5TA31 235 aaPredicted RBP9□□□□□ -0.97
RIF1-206ENST00000453091 SLC26A6Q9BXS9 759 aa9□□□□□ -0.97
RIF1-206ENST00000453091 VAT1LQ9HCJ6 419 aa9□□□□□ -0.97
RIF1-206ENST00000453091 APOBRQ0VD83 1088 aa9□□□□□ -0.97
RIF1-206ENST00000453091 OTUD7BQ6GQQ9 843 aa9□□□□□ -0.97
RIF1-206ENST00000453091 SYT10Q6XYQ8 523 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 GAS2L3Q86XJ1 694 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 DRC1Q96MC2 740 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 FAM170AA1A519 330 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 GTF3C6Q969F1 213 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 EVI5LQ96CN4 794 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 CTNNA3Q9UI47 895 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 KLF18A0A0U1RQI7 1052 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 ANKRD62A6NC57 917 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 IFIT3O14879 490 aaKnown RBP8.99□□□□□ -0.97
RIF1-206ENST00000453091 ZNF213O14771 459 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 SOGA3Q5TF21 947 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 JAKMIP3Q5VZ66 844 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 UBA5Q9GZZ9 404 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 STX17P56962 302 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
RIF1-206ENST00000453091 GPATCH8Q9UKJ3 1502 aaKnown RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 PHACTR2O75167 634 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 COPS6Q7L5N1 327 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 RABEP2Q9H5N1 569 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 PUF60Q9UHX1 559 aaKnown RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 U3KPZ7 1027 aaPredicted RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 KIF5CO60282 957 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 TMEM132AQ24JP5 1023 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 ZSCAN12O43309 604 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 TYRO3Q06418 890 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 CDKL5O76039 1030 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 TERF1P54274 439 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 UVSSAQ2YD98 709 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 CCDC148Q8NFR7 591 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 SLC12A7Q9Y666 1083 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 F8W031 263 aaPredicted RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 IGHMBP2P38935 993 aaKnown RBP8.98□□□□□ -0.97
RIF1-206ENST00000453091 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
RIF1-206ENST00000453091 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
RIF1-206ENST00000453091 TICAM2Q86XR7 235 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 CCDC178Q5BJE1 867 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 GOLGA6L10A6NI86 522 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 SSRP1Q08945 709 aaKnown RBP8.97□□□□□ -0.97
RIF1-206ENST00000453091 MSH6P52701 1360 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 ATP8B2P98198 1209 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 STIM1Q13586 685 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 FKBP15Q5T1M5 1219 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 SPTY2D1Q68D10 685 aaPredicted RBP8.97□□□□□ -0.97
RIF1-206ENST00000453091 CRACR2AQ9BSW2 395 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 NAPBQ9H115 298 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 PTPRCP08575 1304 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 NEFHP12036 1026 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 LARP1Q6PKG0 1096 aaKnown RBP8.97□□□□□ -0.97
RIF1-206ENST00000453091 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 GNL3LQ9NVN8 582 aaKnown RBP8.97□□□□□ -0.97
RIF1-206ENST00000453091 CHMLP26374 656 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 PLIN2Q99541 437 aa8.97□□□□□ -0.97
RIF1-206ENST00000453091 FANCAO15360 1455 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 CCDC191Q8NCU4 936 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 FAM200AQ8TCP9 573 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.96□□□□□ -0.972e-8■■■■■ 177.7
RIF1-206ENST00000453091 RSPH14Q9UHP6 348 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.97
RIF1-206ENST00000453091 SYT1P21579 422 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 TDRD12Q587J7 1177 aaKnown RBP8.96□□□□□ -0.97
RIF1-206ENST00000453091 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
RIF1-206ENST00000453091 MCM6Q14566 821 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 CAPZA3Q96KX2 299 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 PRIMPOLQ96LW4 560 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 ANKIB1Q9P2G1 1089 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 SSR1P43307 286 aaKnown RBP8.96□□□□□ -0.98
RIF1-206ENST00000453091 LONRF3Q496Y0 759 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 KCNH5Q8NCM2 988 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 CCDC94Q9BW85 323 aaPredicted RBP8.96□□□□□ -0.98
RIF1-206ENST00000453091 ATP10BO94823 1461 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 MMRN2Q9H8L6 949 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 PRAG1Q86YV5 1406 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 UBASH3AP57075 661 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 NLRP5P59047 1200 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 TMEM67Q5HYA8 995 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 EYA1Q99502 592 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.96□□□□□ -0.98
RIF1-206ENST00000453091 DCTPP1Q9H773 170 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 TMEM63CQ9P1W3 806 aa8.96□□□□□ -0.98
RIF1-206ENST00000453091 SYCP1Q15431 976 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms