RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 UTP14AQ9BVJ6 771 aaKnown RBP20.81■□□□□ 0.92
SCAMP4-205ENST00000452128 NFKBIEO00221 500 aa20.8■□□□□ 0.92
SCAMP4-205ENST00000452128 EXOSC9Q06265 439 aaKnown RBP20.8■□□□□ 0.92
SCAMP4-205ENST00000452128 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
SCAMP4-205ENST00000452128 MIER1Q8N108 512 aa20.8■□□□□ 0.92
SCAMP4-205ENST00000452128 RNF123Q5XPI4 1314 aa20.79■□□□□ 0.92
SCAMP4-205ENST00000452128 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
SCAMP4-205ENST00000452128 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-205ENST00000452128 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-205ENST00000452128 NPHP1O15259 732 aa20.78■□□□□ 0.92
SCAMP4-205ENST00000452128 G2E3Q7L622 706 aa20.78■□□□□ 0.92
SCAMP4-205ENST00000452128 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
SCAMP4-205ENST00000452128 C21orf2O43822 256 aa20.77■□□□□ 0.92
SCAMP4-205ENST00000452128 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
SCAMP4-205ENST00000452128 SLX4Q8IY92 1834 aa20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 C9orf131Q5VYM1 1079 aa20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 TRMT2AQ8IZ69 625 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 TNRC6CQ9HCJ0 1690 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-205ENST00000452128 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
SCAMP4-205ENST00000452128 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
SCAMP4-205ENST00000452128 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
SCAMP4-205ENST00000452128 RASSF7Q02833 373 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 RIC3Q7Z5B4 369 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 CRAMP1Q96RY5 1269 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 LTBP3Q9NS15 1303 aa20.74■□□□□ 0.91
SCAMP4-205ENST00000452128 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
SCAMP4-205ENST00000452128 ALDH1B1P30837 517 aa20.73■□□□□ 0.91
SCAMP4-205ENST00000452128 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
SCAMP4-205ENST00000452128 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
SCAMP4-205ENST00000452128 PI4KAP2A4QPH2 592 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 PI4KAP1Q8N8J0 262 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 STK31Q9BXU1 1019 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
SCAMP4-205ENST00000452128 LMNB1P20700 586 aa20.71■□□□□ 0.91
SCAMP4-205ENST00000452128 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
SCAMP4-205ENST00000452128 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
SCAMP4-205ENST00000452128 MAP3K2Q9Y2U5 619 aa20.71■□□□□ 0.91
SCAMP4-205ENST00000452128 SBF1O95248 1867 aa20.71■□□□□ 0.91
SCAMP4-205ENST00000452128 E9PSI1 815 aa20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 FLIIQ13045 1269 aa20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 SLC51AQ86UW1 340 aa20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 CDCA7LQ96GN5 454 aa20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 MYD88Q99836 296 aa20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 ZNF219Q9P2Y4 722 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-205ENST00000452128 DDX58O95786 925 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 RNF181Q9P0P0 153 aa20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
SCAMP4-205ENST00000452128 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-205ENST00000452128 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
SCAMP4-205ENST00000452128 PCCAP05165 728 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-205ENST00000452128 RPGRQ92834 1020 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-205ENST00000452128 CCDC93Q567U6 631 aa20.66■□□□□ 0.9
SCAMP4-205ENST00000452128 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-205ENST00000452128 ZC3H4Q9UPT8 1303 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-205ENST00000452128 ABCC4O15439 1325 aa20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 IRS4O14654 1257 aaPredicted RBP20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 RTKN2Q8IZC4 609 aa20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
SCAMP4-205ENST00000452128 H7C1W4 665 aa20.64■□□□□ 0.89
SCAMP4-205ENST00000452128 KIF3CO14782 793 aa20.64■□□□□ 0.89
SCAMP4-205ENST00000452128 BBOX1O75936 387 aa20.64■□□□□ 0.89
SCAMP4-205ENST00000452128 FKBP4Q02790 459 aaKnown RBP eCLIP20.64■□□□□ 0.897e-6■■■■□ 25.4
SCAMP4-205ENST00000452128 ATP6V0A2Q9Y487 856 aa20.64■□□□□ 0.89
SCAMP4-205ENST00000452128 CASP7P55210 303 aa20.63■□□□□ 0.89
SCAMP4-205ENST00000452128 CWF19L2Q2TBE0 894 aaKnown RBP20.63■□□□□ 0.89
SCAMP4-205ENST00000452128 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
SCAMP4-205ENST00000452128 PSMD1Q99460 953 aa20.63■□□□□ 0.89
SCAMP4-205ENST00000452128 GPBP1L1Q9HC44 474 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-205ENST00000452128 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 GRAPQ13588 217 aa20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 MRPL50Q8N5N7 158 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 JARID2Q92833 1246 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-205ENST00000452128 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 CACNA1FO60840 1977 aa20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 PPEF1O14829 653 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 GRIPAP1Q4V328 841 aa20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 BEND3Q5T5X7 828 aa20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 LINS1Q8NG48 757 aa20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 ZNF526Q8TF50 670 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-205ENST00000452128 LAMB2P55268 1798 aa20.6■□□□□ 0.89
SCAMP4-205ENST00000452128 GCKRQ14397 625 aa20.6■□□□□ 0.89
SCAMP4-205ENST00000452128 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-205ENST00000452128 ZNF277Q9NRM2 450 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms