RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
CTNS-204ENST00000452111 ZNF428Q96B54 188 aa23.21■■□□□ 1.31
CTNS-204ENST00000452111 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
CTNS-204ENST00000452111 ALDH1B1P30837 517 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 CCDC93Q567U6 631 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 OLFM4Q6UX06 510 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 ANKRD13DQ6ZTN6 518 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 C3orf67Q6ZVT6 689 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
CTNS-204ENST00000452111 KDM2BQ8NHM5 1336 aa23.19■■□□□ 1.3
CTNS-204ENST00000452111 ZC3H4Q9UPT8 1303 aaKnown RBP23.19■■□□□ 1.3
CTNS-204ENST00000452111 SBF1O95248 1867 aa23.19■■□□□ 1.3
CTNS-204ENST00000452111 CACNA1SQ13698 1873 aa23.18■■□□□ 1.3
CTNS-204ENST00000452111 LTBP3Q9NS15 1303 aa23.18■■□□□ 1.3
CTNS-204ENST00000452111 TRMT112Q9UI30 125 aaKnown RBP23.18■■□□□ 1.3
CTNS-204ENST00000452111 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
CTNS-204ENST00000452111 NCBP3Q53F19 620 aaKnown RBP23.17■■□□□ 1.3
CTNS-204ENST00000452111 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
CTNS-204ENST00000452111 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
CTNS-204ENST00000452111 IL16Q14005 1332 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 ATP5J2-PTCD1G3V325 749 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 SYNE4Q8N205 404 aa23.16■■□□□ 1.3
CTNS-204ENST00000452111 RBM17Q96I25 401 aaKnown RBP23.16■■□□□ 1.3
CTNS-204ENST00000452111 HCLS1P14317 486 aaPredicted RBP23.15■■□□□ 1.3
CTNS-204ENST00000452111 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
CTNS-204ENST00000452111 SLC10A5Q5PT55 438 aa23.15■■□□□ 1.3
CTNS-204ENST00000452111 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
CTNS-204ENST00000452111 FER1L6Q2WGJ9 1857 aa23.15■■□□□ 1.3
CTNS-204ENST00000452111 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
CTNS-204ENST00000452111 ISCA1Q9BUE6 129 aa23.14■■□□□ 1.29
CTNS-204ENST00000452111 RRAGCQ9HB90 399 aa23.14■■□□□ 1.29
CTNS-204ENST00000452111 ANKRD36CQ5JPF3 1778 aa23.14■■□□□ 1.29
CTNS-204ENST00000452111 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.29
CTNS-204ENST00000452111 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
CTNS-204ENST00000452111 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
CTNS-204ENST00000452111 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
CTNS-204ENST00000452111 GLTPD2A6NH11 291 aa23.12■■□□□ 1.29
CTNS-204ENST00000452111 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
CTNS-204ENST00000452111 TWISTNBQ3B726 338 aaPredicted RBP23.12■■□□□ 1.29
CTNS-204ENST00000452111 TIAM2Q8IVF5 1701 aa23.12■■□□□ 1.29
CTNS-204ENST00000452111 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
CTNS-204ENST00000452111 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
CTNS-204ENST00000452111 PPEF1O14829 653 aaPredicted RBP23.11■■□□□ 1.29
CTNS-204ENST00000452111 TOMM70O94826 608 aa23.11■■□□□ 1.29
CTNS-204ENST00000452111 SLC51AQ86UW1 340 aa23.11■■□□□ 1.29
CTNS-204ENST00000452111 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
CTNS-204ENST00000452111 C16orf71Q8IYS4 520 aaPredicted RBP23.11■■□□□ 1.29
CTNS-204ENST00000452111 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
CTNS-204ENST00000452111 MYD88Q99836 296 aa23.1■■□□□ 1.29
CTNS-204ENST00000452111 STK31Q9BXU1 1019 aa23.1■■□□□ 1.29
CTNS-204ENST00000452111 DPY19L2Q6NUT2 758 aa23.09■■□□□ 1.29
CTNS-204ENST00000452111 FAM89AQ96GI7 184 aa23.09■■□□□ 1.29
CTNS-204ENST00000452111 ABCC4O15439 1325 aa23.08■■□□□ 1.29
CTNS-204ENST00000452111 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
CTNS-204ENST00000452111 CC2D2BQ6DHV5 1058 aa23.08■■□□□ 1.29
CTNS-204ENST00000452111 SNED1Q8TER0 1413 aa23.08■■□□□ 1.28
CTNS-204ENST00000452111 CCDC88AQ3V6T2 1871 aa23.07■■□□□ 1.28
CTNS-204ENST00000452111 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
CTNS-204ENST00000452111 IARSP41252 1262 aaKnown RBP23.06■■□□□ 1.28
CTNS-204ENST00000452111 PSMD1Q99460 953 aa23.06■■□□□ 1.28
CTNS-204ENST00000452111 SPINK5Q9NQ38 1064 aaPredicted RBP23.06■■□□□ 1.28
CTNS-204ENST00000452111 HSPA6P17066 643 aa23.05■■□□□ 1.28
CTNS-204ENST00000452111 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
CTNS-204ENST00000452111 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
CTNS-204ENST00000452111 TMX4Q9H1E5 349 aaPredicted RBP23.05■■□□□ 1.28
CTNS-204ENST00000452111 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
CTNS-204ENST00000452111 DDNO94850 711 aaPredicted RBP23.04■■□□□ 1.28
CTNS-204ENST00000452111 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CTNS-204ENST00000452111 VEGFAP15692 232 aaPredicted RBP23.04■■□□□ 1.28
CTNS-204ENST00000452111 EXOSC9Q06265 439 aaKnown RBP23.04■■□□□ 1.28
CTNS-204ENST00000452111 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
CTNS-204ENST00000452111 ATP6V0A2Q9Y487 856 aa23.04■■□□□ 1.28
CTNS-204ENST00000452111 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
CTNS-204ENST00000452111 IRS4O14654 1257 aaPredicted RBP23.03■■□□□ 1.28
CTNS-204ENST00000452111 KSR2Q6VAB6 950 aa23.03■■□□□ 1.28
CTNS-204ENST00000452111 G2E3Q7L622 706 aa23.03■■□□□ 1.28
CTNS-204ENST00000452111 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
CTNS-204ENST00000452111 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
CTNS-204ENST00000452111 BBOX1O75936 387 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 GRAPQ13588 217 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 CCDC191Q8NCU4 936 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
CTNS-204ENST00000452111 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 CWC25Q9NXE8 425 aaPredicted RBP23.02■■□□□ 1.28
CTNS-204ENST00000452111 ZNF541Q9H0D2 1346 aa23.02■■□□□ 1.28
CTNS-204ENST00000452111 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
CTNS-204ENST00000452111 POTECB2RU33 542 aa23.01■■□□□ 1.27
CTNS-204ENST00000452111 VAMP4O75379 141 aa23.01■■□□□ 1.27
CTNS-204ENST00000452111 LAMB2P55268 1798 aa23.01■■□□□ 1.27
CTNS-204ENST00000452111 SF3B3Q15393 1217 aaKnown RBP23■■□□□ 1.27
CTNS-204ENST00000452111 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
CTNS-204ENST00000452111 DDX60Q8IY21 1712 aaKnown RBP22.99■■□□□ 1.27
CTNS-204ENST00000452111 FLIIQ13045 1269 aa22.99■■□□□ 1.27
CTNS-204ENST00000452111 LARGE2Q8N3Y3 721 aa22.99■■□□□ 1.27
CTNS-204ENST00000452111 JDP2Q8WYK2 163 aa22.99■■□□□ 1.27
CTNS-204ENST00000452111 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms