RNA–Protein interactions for RNA: ENST00000451734.1

NIFK-204, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-204ENST00000451734 ALDH1B1P30837 517 aa22.43■■□□□ 1.18
NIFK-204ENST00000451734 SLC10A5Q5PT55 438 aa22.43■■□□□ 1.18
NIFK-204ENST00000451734 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
NIFK-204ENST00000451734 OLFM4Q6UX06 510 aa22.43■■□□□ 1.18
NIFK-204ENST00000451734 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
NIFK-204ENST00000451734 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
NIFK-204ENST00000451734 IL16Q14005 1332 aa22.42■■□□□ 1.18
NIFK-204ENST00000451734 LTBP3Q9NS15 1303 aa22.42■■□□□ 1.18
NIFK-204ENST00000451734 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
NIFK-204ENST00000451734 PHAXQ9H814 394 aaKnown RBP22.42■■□□□ 1.18
NIFK-204ENST00000451734 SLX4Q8IY92 1834 aa22.41■■□□□ 1.18
NIFK-204ENST00000451734 CCDC93Q567U6 631 aa22.41■■□□□ 1.18
NIFK-204ENST00000451734 SYNE4Q8N205 404 aa22.41■■□□□ 1.18
NIFK-204ENST00000451734 RPGRQ92834 1020 aaKnown RBP22.41■■□□□ 1.18
NIFK-204ENST00000451734 ZNF428Q96B54 188 aa22.41■■□□□ 1.18
NIFK-204ENST00000451734 TNRC6CQ9HCJ0 1690 aaKnown RBP22.4■■□□□ 1.18
NIFK-204ENST00000451734 ZC3H4Q9UPT8 1303 aaKnown RBP22.4■■□□□ 1.18
NIFK-204ENST00000451734 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
NIFK-204ENST00000451734 ISCA1Q9BUE6 129 aa22.4■■□□□ 1.18
NIFK-204ENST00000451734 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
NIFK-204ENST00000451734 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.18
NIFK-204ENST00000451734 ATP5J2-PTCD1G3V325 749 aa22.39■■□□□ 1.17
NIFK-204ENST00000451734 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
NIFK-204ENST00000451734 KDM2BQ8NHM5 1336 aa22.38■■□□□ 1.17
NIFK-204ENST00000451734 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
NIFK-204ENST00000451734 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
NIFK-204ENST00000451734 RBM17Q96I25 401 aaKnown RBP22.38■■□□□ 1.17
NIFK-204ENST00000451734 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
NIFK-204ENST00000451734 SH3TC1Q8TE82 1336 aa22.37■■□□□ 1.17
NIFK-204ENST00000451734 GOLGA2Q08379 1002 aa22.37■■□□□ 1.17
NIFK-204ENST00000451734 RIC3Q7Z5B4 369 aa22.37■■□□□ 1.17
NIFK-204ENST00000451734 TCERG1O14776 1098 aaKnown RBP22.36■■□□□ 1.17
NIFK-204ENST00000451734 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
NIFK-204ENST00000451734 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
NIFK-204ENST00000451734 RTKN2Q8IZC4 609 aa22.36■■□□□ 1.17
NIFK-204ENST00000451734 CHMP4AQ9BY43 222 aa22.36■■□□□ 1.17
NIFK-204ENST00000451734 RRAGCQ9HB90 399 aa22.36■■□□□ 1.17
NIFK-204ENST00000451734 SBF1O95248 1867 aa22.36■■□□□ 1.17
NIFK-204ENST00000451734 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
NIFK-204ENST00000451734 GLTPD2A6NH11 291 aa22.35■■□□□ 1.17
NIFK-204ENST00000451734 FKBP4Q02790 459 aaKnown RBP eCLIP22.35■■□□□ 1.17
NIFK-204ENST00000451734 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
NIFK-204ENST00000451734 FAM89AQ96GI7 184 aa22.34■■□□□ 1.17
NIFK-204ENST00000451734 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
NIFK-204ENST00000451734 ZNF277Q9NRM2 450 aaPredicted RBP22.34■■□□□ 1.17
NIFK-204ENST00000451734 TOMM70O94826 608 aa22.33■■□□□ 1.17
NIFK-204ENST00000451734 PPEF1O14829 653 aaPredicted RBP22.32■■□□□ 1.16
NIFK-204ENST00000451734 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
NIFK-204ENST00000451734 MYD88Q99836 296 aa22.32■■□□□ 1.16
NIFK-204ENST00000451734 FER1L6Q2WGJ9 1857 aa22.32■■□□□ 1.16
NIFK-204ENST00000451734 ABCC4O15439 1325 aa22.31■■□□□ 1.16
NIFK-204ENST00000451734 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
NIFK-204ENST00000451734 RTL5Q5HYW3 569 aaPredicted RBP22.31■■□□□ 1.16
NIFK-204ENST00000451734 STK31Q9BXU1 1019 aa22.31■■□□□ 1.16
NIFK-204ENST00000451734 ARFGEF2Q9Y6D5 1785 aa22.3■■□□□ 1.16
NIFK-204ENST00000451734 DDX58O95786 925 aaKnown RBP22.3■■□□□ 1.16
NIFK-204ENST00000451734 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
NIFK-204ENST00000451734 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
NIFK-204ENST00000451734 G2E3Q7L622 706 aa22.3■■□□□ 1.16
NIFK-204ENST00000451734 PSMD1Q99460 953 aa22.3■■□□□ 1.16
NIFK-204ENST00000451734 METTL22Q9BUU2 404 aaPredicted RBP22.3■■□□□ 1.16
NIFK-204ENST00000451734 VAMP4O75379 141 aa22.29■■□□□ 1.16
NIFK-204ENST00000451734 SLC4A2P04920 1241 aa22.29■■□□□ 1.16
NIFK-204ENST00000451734 MAP3K2Q9Y2U5 619 aa22.29■■□□□ 1.16
NIFK-204ENST00000451734 PI4KAP2A4QPH2 592 aa22.28■■□□□ 1.16
NIFK-204ENST00000451734 POTECB2RU33 542 aa22.28■■□□□ 1.16
NIFK-204ENST00000451734 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
NIFK-204ENST00000451734 KSR2Q6VAB6 950 aa22.28■■□□□ 1.16
NIFK-204ENST00000451734 DDX46Q7L014 1031 aaKnown RBP22.28■■□□□ 1.16
NIFK-204ENST00000451734 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
NIFK-204ENST00000451734 PI4KAP1Q8N8J0 262 aa22.28■■□□□ 1.16
NIFK-204ENST00000451734 ATP6V0A2Q9Y487 856 aa22.28■■□□□ 1.16
NIFK-204ENST00000451734 IRS4O14654 1257 aaPredicted RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 BBOX1O75936 387 aa22.27■■□□□ 1.16
NIFK-204ENST00000451734 DDNO94850 711 aaPredicted RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 SF3B3Q15393 1217 aaKnown RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 ZBTB38Q8NAP3 1195 aaPredicted RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
NIFK-204ENST00000451734 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
NIFK-204ENST00000451734 ANKRD36CQ5JPF3 1778 aa22.27■■□□□ 1.16
NIFK-204ENST00000451734 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 HSPA6P17066 643 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 GRAPQ13588 217 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 GRAPLQ8TC17 118 aaPredicted RBP22.26■■□□□ 1.15
NIFK-204ENST00000451734 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 ZNF521Q96K83 1311 aa22.26■■□□□ 1.15
NIFK-204ENST00000451734 JARID2Q92833 1246 aaPredicted RBP22.25■■□□□ 1.15
NIFK-204ENST00000451734 CWC25Q9NXE8 425 aaPredicted RBP22.25■■□□□ 1.15
NIFK-204ENST00000451734 IGKV5-2P06315 115 aa22.24■■□□□ 1.15
NIFK-204ENST00000451734 SP8Q8IXZ3 490 aa22.24■■□□□ 1.15
NIFK-204ENST00000451734 ZNF541Q9H0D2 1346 aa22.24■■□□□ 1.15
NIFK-204ENST00000451734 PCCAP05165 728 aaPredicted RBP22.23■■□□□ 1.15
NIFK-204ENST00000451734 FLIIQ13045 1269 aa22.23■■□□□ 1.15
NIFK-204ENST00000451734 TMX4Q9H1E5 349 aaPredicted RBP22.23■■□□□ 1.15
NIFK-204ENST00000451734 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
NIFK-204ENST00000451734 FZD9O00144 591 aa22.22■■□□□ 1.15
NIFK-204ENST00000451734 CELF1Q92879 486 aaKnown RBP22.22■■□□□ 1.15
NIFK-204ENST00000451734 JDP2Q8WYK2 163 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms