RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 FOXO4P98177 505 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 BCORQ6W2J9 1755 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 NUP98P52948 1817 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 GPTP24298 496 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 FAM161AQ3B820 660 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 PLA2G12BQ9BX93 195 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
NDUFA3-209ENST00000451517 UBN2Q6ZU65 1347 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 APBB1O00213 710 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 GNPATO15228 680 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 CLEC4GQ6UXB4 293 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
NDUFA3-209ENST00000451517 PARP10Q53GL7 1025 aa13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 COPRSQ9NQ92 184 aa13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
NDUFA3-209ENST00000451517 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
NDUFA3-209ENST00000451517 PLSCR1O15162 318 aa13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 OTUD7AQ8TE49 926 aaPredicted RBP13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
NDUFA3-209ENST00000451517 ADRA2BP18089 450 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 AMIGO3Q86WK7 504 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 AK7Q96M32 723 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 OSBPL3Q9H4L5 887 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
NDUFA3-209ENST00000451517 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 NTSR2O95665 410 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 CSF1RP07333 972 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 SYNE4Q8N205 404 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 PROM2Q8N271 834 aa13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 UTP14AQ9BVJ6 771 aaKnown RBP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
NDUFA3-209ENST00000451517 PDE1AP54750 535 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 IL1RAPL2Q9NP60 686 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 TNS1Q9HBL0 1735 aaKnown RBP13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
NDUFA3-209ENST00000451517 C4AP0C0L4 1744 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 PDE8AO60658 829 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 ZPR1O75312 459 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 SASH1O94885 1247 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 APBA3O96018 575 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 CTSWP56202 376 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 AOX1Q06278 1338 aa13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
NDUFA3-209ENST00000451517 RGPD3A6NKT7 1758 aaPredicted RBP13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 RGPD4Q7Z3J3 1758 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 MX1P20591 662 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 SSFA2P28290 1259 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 TTLL11Q8NHH1 800 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 SIL1Q9H173 461 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
NDUFA3-209ENST00000451517 CIAO1O76071 339 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 RFC4P35249 363 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 CLASRPQ8N2M8 674 aaKnown RBP13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 LAMB2P55268 1798 aa13.83□□□□□ -0.2
NDUFA3-209ENST00000451517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
NDUFA3-209ENST00000451517 EYA2O00167 538 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms