RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ZNF609O15014 1411 aa8.21□□□□□ -1.09
USP46-202ENST00000451218 ANKRD31Q8N7Z5 1873 aa8.21□□□□□ -1.09
USP46-202ENST00000451218 INTS5Q6P9B9 1019 aaKnown RBP8.21□□□□□ -1.09
USP46-202ENST00000451218 HSP90AB1P08238 724 aaKnown RBP8.21□□□□□ -1.1
USP46-202ENST00000451218 ATG9AQ7Z3C6 839 aa8.21□□□□□ -1.1
USP46-202ENST00000451218 UBN2Q6ZU65 1347 aa8.21□□□□□ -1.1
USP46-202ENST00000451218 MYL6BP14649 208 aa8.21□□□□□ -1.1
USP46-202ENST00000451218 PLBD2Q8NHP8 589 aa8.21□□□□□ -1.1
USP46-202ENST00000451218 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
USP46-202ENST00000451218 CHMP4BQ9H444 224 aaKnown RBP8.21□□□□□ -1.1
USP46-202ENST00000451218 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 UBTFL1P0CB47 393 aaPredicted RBP8.2□□□□□ -1.1
USP46-202ENST00000451218 CABP4P57796 275 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 CDK5RAP2Q96SN8 1893 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
USP46-202ENST00000451218 THRAP3Q9Y2W1 955 aaKnown RBP8.2□□□□□ -1.1
USP46-202ENST00000451218 C22orf23Q9BZE7 217 aa8.2□□□□□ -1.1
USP46-202ENST00000451218 CHD4Q14839 1912 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 ITPK1Q13572 414 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 CACNA1SQ13698 1873 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 HLFQ16534 295 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 SNX21Q969T3 373 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 EAF2Q96CJ1 260 aaPredicted RBP8.19□□□□□ -1.1
USP46-202ENST00000451218 LRRCC1Q9C099 1032 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 QSER1Q2KHR3 1735 aa8.19□□□□□ -1.1
USP46-202ENST00000451218 MX1P20591 662 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 JARID2Q92833 1246 aaPredicted RBP8.18□□□□□ -1.1
USP46-202ENST00000451218 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 U3KPZ7 1027 aaPredicted RBP8.18□□□□□ -1.1
USP46-202ENST00000451218 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 CHGBP05060 677 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 CHMLP26374 656 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 DNAJC10Q8IXB1 793 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 MYD88Q99836 296 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 MYH13Q9UKX3 1938 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 MED23Q9ULK4 1368 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 SYNE4Q8N205 404 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
USP46-202ENST00000451218 DDX60LQ5H9U9 1706 aaKnown RBP8.18□□□□□ -1.1
USP46-202ENST00000451218 ANP32AP39687 249 aaKnown RBP8.18□□□□□ -1.1
USP46-202ENST00000451218 KCNB2Q92953 911 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 IL1RAPL2Q9NP60 686 aa8.18□□□□□ -1.1
USP46-202ENST00000451218 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
USP46-202ENST00000451218 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
USP46-202ENST00000451218 DDX54Q8TDD1 881 aaKnown RBP8.17□□□□□ -1.1
USP46-202ENST00000451218 VGLL2Q8N8G2 317 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 PLA2G12BQ9BX93 195 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 TIAM2Q8IVF5 1701 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 KCNQ2O43526 872 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 CDC45O75419 566 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 CSF1RP07333 972 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 MFAP1P55081 439 aaKnown RBP8.17□□□□□ -1.1
USP46-202ENST00000451218 AIMP1Q12904 312 aaKnown RBP8.17□□□□□ -1.1
USP46-202ENST00000451218 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 FOXP2O15409 715 aa8.17□□□□□ -1.1
USP46-202ENST00000451218 VPS72Q15906 364 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 ZBTB1Q9Y2K1 713 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 MAST2Q6P0Q8 1798 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 ATP5J2-PTCD1G3V325 749 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
USP46-202ENST00000451218 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 LSG1Q9H089 658 aaKnown RBP8.16□□□□□ -1.1
USP46-202ENST00000451218 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 DBNLQ9UJU6 430 aaKnown RBP8.16□□□□□ -1.1
USP46-202ENST00000451218 TCHHQ07283 1943 aa8.16□□□□□ -1.1
USP46-202ENST00000451218 EIF5P55010 431 aaKnown RBP8.15□□□□□ -1.1
USP46-202ENST00000451218 FOCADQ5VW36 1801 aa8.15□□□□□ -1.1
USP46-202ENST00000451218 CYP2E1P05181 493 aaPredicted RBP8.15□□□□□ -1.1
USP46-202ENST00000451218 ZNF34Q8IZ26 560 aa8.15□□□□□ -1.1
USP46-202ENST00000451218 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.1
USP46-202ENST00000451218 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.11
USP46-202ENST00000451218 PRIM1P49642 420 aaKnown RBP8.15□□□□□ -1.11
USP46-202ENST00000451218 COL1A1P02452 1464 aaPredicted RBP8.14□□□□□ -1.11
USP46-202ENST00000451218 LAMB1P07942 1786 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 TTC41PQ6P2S7 1318 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 APBB1O00213 710 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 ST3GAL1Q11201 340 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 KIF1BPQ96EK5 621 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 TMOD3Q9NYL9 352 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 PALLDQ8WX93 1383 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 CDHR2Q9BYE9 1310 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 HMMRO75330 724 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 CAMTA2O94983 1202 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 RPAP1Q9BWH6 1393 aaPredicted RBP8.14□□□□□ -1.11
USP46-202ENST00000451218 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 UBE3BQ7Z3V4 1068 aa8.14□□□□□ -1.11
USP46-202ENST00000451218 SGSM2O43147 1006 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 SURF6O75683 361 aaKnown RBP8.13□□□□□ -1.11
USP46-202ENST00000451218 NLRP10Q86W26 655 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 TTC5Q8N0Z6 440 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 TTC14Q96N46 770 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms