RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 C7orf43Q8WVR3 580 aa19.83■□□□□ 0.77
CHD3-205ENST00000449744 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
CHD3-205ENST00000449744 DBF4Q9UBU7 674 aaPredicted RBP19.83■□□□□ 0.77
CHD3-205ENST00000449744 TIAM2Q8IVF5 1701 aa19.82■□□□□ 0.76
CHD3-205ENST00000449744 ZNF853P0CG23 659 aa19.82■□□□□ 0.76
CHD3-205ENST00000449744 CRY2Q49AN0 593 aa19.82■□□□□ 0.76
CHD3-205ENST00000449744 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
CHD3-205ENST00000449744 RIC1Q4ADV7 1423 aa19.82■□□□□ 0.76
CHD3-205ENST00000449744 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
CHD3-205ENST00000449744 IFFO2Q5TF58 517 aa19.81■□□□□ 0.76
CHD3-205ENST00000449744 RBM46Q8TBY0 533 aaKnown RBP19.81■□□□□ 0.76
CHD3-205ENST00000449744 APLP1P51693 650 aa19.8■□□□□ 0.76
CHD3-205ENST00000449744 TCIRG1Q13488 830 aa19.8■□□□□ 0.76
CHD3-205ENST00000449744 RTKN2Q8IZC4 609 aa19.8■□□□□ 0.76
CHD3-205ENST00000449744 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
CHD3-205ENST00000449744 NLRP3Q96P20 1036 aa19.8■□□□□ 0.76
CHD3-205ENST00000449744 HYPKQ9NX55 129 aa19.8■□□□□ 0.76
CHD3-205ENST00000449744 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
CHD3-205ENST00000449744 FKBP4Q02790 459 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHD3-205ENST00000449744 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
CHD3-205ENST00000449744 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
CHD3-205ENST00000449744 HOXA10P31260 410 aaPredicted RBP19.78■□□□□ 0.76
CHD3-205ENST00000449744 ANKRD13DQ6ZTN6 518 aa19.78■□□□□ 0.76
CHD3-205ENST00000449744 NLRP10Q86W26 655 aa19.78■□□□□ 0.76
CHD3-205ENST00000449744 PLBD2Q8NHP8 589 aa19.78■□□□□ 0.76
CHD3-205ENST00000449744 DICER1Q9UPY3 1922 aaKnown RBP19.78■□□□□ 0.76
CHD3-205ENST00000449744 SLC10A5Q5PT55 438 aa19.77■□□□□ 0.76
CHD3-205ENST00000449744 CC2D2BQ6DHV5 1058 aa19.77■□□□□ 0.76
CHD3-205ENST00000449744 OLFM4Q6UX06 510 aa19.77■□□□□ 0.76
CHD3-205ENST00000449744 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
CHD3-205ENST00000449744 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
CHD3-205ENST00000449744 ANKRD36CQ5JPF3 1778 aa19.77■□□□□ 0.76
CHD3-205ENST00000449744 CHMP4AQ9BY43 222 aa19.76■□□□□ 0.75
CHD3-205ENST00000449744 ZNF277Q9NRM2 450 aaPredicted RBP19.76■□□□□ 0.75
CHD3-205ENST00000449744 FSTL1Q12841 308 aa19.75■□□□□ 0.75
CHD3-205ENST00000449744 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
CHD3-205ENST00000449744 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
CHD3-205ENST00000449744 TMX4Q9H1E5 349 aaPredicted RBP19.75■□□□□ 0.75
CHD3-205ENST00000449744 SH3TC1Q8TE82 1336 aa19.75■□□□□ 0.75
CHD3-205ENST00000449744 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
CHD3-205ENST00000449744 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
CHD3-205ENST00000449744 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
CHD3-205ENST00000449744 C3orf67Q6ZVT6 689 aa19.74■□□□□ 0.75
CHD3-205ENST00000449744 C8orf58Q8NAV2 365 aa19.74■□□□□ 0.75
CHD3-205ENST00000449744 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
CHD3-205ENST00000449744 IARSP41252 1262 aaKnown RBP19.73■□□□□ 0.75
CHD3-205ENST00000449744 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
CHD3-205ENST00000449744 RIC3Q7Z5B4 369 aa19.73■□□□□ 0.75
CHD3-205ENST00000449744 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
CHD3-205ENST00000449744 DDNO94850 711 aaPredicted RBP19.72■□□□□ 0.75
CHD3-205ENST00000449744 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
CHD3-205ENST00000449744 WWC1Q8IX03 1113 aa19.72■□□□□ 0.75
CHD3-205ENST00000449744 PSMD1Q99460 953 aa19.72■□□□□ 0.75
CHD3-205ENST00000449744 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
CHD3-205ENST00000449744 ATP5J2-PTCD1G3V325 749 aa19.71■□□□□ 0.75
CHD3-205ENST00000449744 TSR2Q969E8 191 aaKnown RBP19.71■□□□□ 0.75
CHD3-205ENST00000449744 ZNF428Q96B54 188 aa19.71■□□□□ 0.75
CHD3-205ENST00000449744 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
CHD3-205ENST00000449744 PHAXQ9H814 394 aaKnown RBP19.71■□□□□ 0.75
CHD3-205ENST00000449744 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
CHD3-205ENST00000449744 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
CHD3-205ENST00000449744 JDP2Q8WYK2 163 aa19.7■□□□□ 0.74
CHD3-205ENST00000449744 ABCC4O15439 1325 aa19.7■□□□□ 0.74
CHD3-205ENST00000449744 POTECB2RU33 542 aa19.69■□□□□ 0.74
CHD3-205ENST00000449744 IL16Q14005 1332 aa19.69■□□□□ 0.74
CHD3-205ENST00000449744 BBOX1O75936 387 aa19.68■□□□□ 0.74
CHD3-205ENST00000449744 DDX58O95786 925 aaKnown RBP19.68■□□□□ 0.74
CHD3-205ENST00000449744 TSPYL6Q8N831 410 aa19.68■□□□□ 0.74
CHD3-205ENST00000449744 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
CHD3-205ENST00000449744 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
CHD3-205ENST00000449744 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
CHD3-205ENST00000449744 SNED1Q8TER0 1413 aa19.68■□□□□ 0.74
CHD3-205ENST00000449744 IQCA1LA6NCM1 817 aa19.67■□□□□ 0.74
CHD3-205ENST00000449744 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
CHD3-205ENST00000449744 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
CHD3-205ENST00000449744 GRAPQ13588 217 aa19.66■□□□□ 0.74
CHD3-205ENST00000449744 TWISTNBQ3B726 338 aaPredicted RBP19.66■□□□□ 0.74
CHD3-205ENST00000449744 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
CHD3-205ENST00000449744 LARGE2Q8N3Y3 721 aa19.66■□□□□ 0.74
CHD3-205ENST00000449744 DNAJC5GQ8N7S2 189 aa19.66■□□□□ 0.74
CHD3-205ENST00000449744 GRAPLQ8TC17 118 aaPredicted RBP19.66■□□□□ 0.74
CHD3-205ENST00000449744 MYD88Q99836 296 aa19.66■□□□□ 0.74
CHD3-205ENST00000449744 ZNF541Q9H0D2 1346 aa19.66■□□□□ 0.74
CHD3-205ENST00000449744 LAMB2P55268 1798 aa19.65■□□□□ 0.74
CHD3-205ENST00000449744 FZD9O00144 591 aa19.65■□□□□ 0.74
CHD3-205ENST00000449744 EIF6P56537 245 aaKnown RBP19.65■□□□□ 0.74
CHD3-205ENST00000449744 SP8Q8IXZ3 490 aa19.65■□□□□ 0.74
CHD3-205ENST00000449744 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
CHD3-205ENST00000449744 SUPT20HQ8NEM7 779 aa19.65■□□□□ 0.74
CHD3-205ENST00000449744 L3MBTL3Q96JM7 780 aaPredicted RBP19.65■□□□□ 0.74
CHD3-205ENST00000449744 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.73
CHD3-205ENST00000449744 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.73
CHD3-205ENST00000449744 HTRA3P83110 453 aa19.64■□□□□ 0.73
CHD3-205ENST00000449744 SLC51AQ86UW1 340 aa19.64■□□□□ 0.73
CHD3-205ENST00000449744 WDR63Q8IWG1 891 aa19.64■□□□□ 0.73
CHD3-205ENST00000449744 PPIP5K2O43314 1243 aa19.63■□□□□ 0.73
CHD3-205ENST00000449744 DPP8Q6V1X1 898 aaPredicted RBP19.63■□□□□ 0.73
CHD3-205ENST00000449744 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
CHD3-205ENST00000449744 NIM1KQ8IY84 436 aa19.63■□□□□ 0.73
CHD3-205ENST00000449744 MPNDQ8N594 471 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms