RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 TSPYL4Q9UJ04 414 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 IBTKQ9P2D0 1353 aaPredicted RBP9.84□□□□□ -0.83
LINC00954-202ENST00000449086 COL5A3P25940 1745 aaPredicted RBP9.84□□□□□ -0.83
LINC00954-202ENST00000449086 IGSF3O75054 1194 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 RABEP1Q15276 862 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 C17orf53Q8N3J3 647 aaPredicted RBP9.84□□□□□ -0.83
LINC00954-202ENST00000449086 CCDC94Q9BW85 323 aaPredicted RBP9.84□□□□□ -0.83
LINC00954-202ENST00000449086 LRSAM1Q6UWE0 723 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 ST18O60284 1047 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
LINC00954-202ENST00000449086 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 PTF1AQ7RTS3 328 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 RNF39Q9H2S5 420 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00954-202ENST00000449086 TAF1LQ8IZX4 1826 aa9.83□□□□□ -0.84
LINC00954-202ENST00000449086 LOC102724428A0A0B4J2F2 783 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 CT47B1P0C2W7 299 aaPredicted RBP9.82□□□□□ -0.84
LINC00954-202ENST00000449086 SIK1P57059 783 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 GCC1Q96CN9 775 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 QSER1Q2KHR3 1735 aa9.82□□□□□ -0.84
LINC00954-202ENST00000449086 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
LINC00954-202ENST00000449086 SNRPA1P09661 255 aaKnown RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 PPP4R3BQ5MIZ7 849 aa9.81□□□□□ -0.84
LINC00954-202ENST00000449086 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 SLC39A6Q13433 755 aa9.81□□□□□ -0.84
LINC00954-202ENST00000449086 TXNRD1Q16881 649 aa9.81□□□□□ -0.84
LINC00954-202ENST00000449086 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 CCNL1Q9UK58 526 aaPredicted RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 CNTNAP4Q9C0A0 1308 aa9.81□□□□□ -0.84
LINC00954-202ENST00000449086 GSPT1P15170 499 aaKnown RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 MCM5P33992 734 aa9.81□□□□□ -0.84
LINC00954-202ENST00000449086 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
LINC00954-202ENST00000449086 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 ZSCAN20P17040 1043 aaPredicted RBP9.8□□□□□ -0.84
LINC00954-202ENST00000449086 DMTNQ08495 405 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 CLEC17AQ6ZS10 378 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 TSPY26PQ9H489 355 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 SOCS7O14512 581 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 ZBTB7BO15156 539 aaPredicted RBP9.8□□□□□ -0.84
LINC00954-202ENST00000449086 VAMP4O75379 141 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
LINC00954-202ENST00000449086 C8orf58Q8NAV2 365 aa9.8□□□□□ -0.84
LINC00954-202ENST00000449086 STARD3NLO95772 234 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 PROM2Q8N271 834 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 KCNQ3O43525 872 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 NEK4P51957 841 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
LINC00954-202ENST00000449086 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
LINC00954-202ENST00000449086 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 OTUD7AQ8TE49 926 aaPredicted RBP9.79□□□□□ -0.84
LINC00954-202ENST00000449086 SLC4A9Q96Q91 983 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
LINC00954-202ENST00000449086 MIS18AQ9NYP9 233 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
LINC00954-202ENST00000449086 PTCD1O75127 700 aaKnown RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 EZH2Q15910 746 aaKnown RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 SIRT2Q8IXJ6 389 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 KIF3AQ9Y496 699 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 MBD3O95983 291 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 CYP19A1P11511 503 aaPredicted RBP9.78□□□□□ -0.84
LINC00954-202ENST00000449086 ITPK1Q13572 414 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
LINC00954-202ENST00000449086 ATP2B3Q16720 1220 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 PLEKHM2Q8IWE5 1019 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 RGL2O15211 777 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 HMGN5P82970 282 aaKnown RBP9.77□□□□□ -0.85
LINC00954-202ENST00000449086 DNAJC10Q8IXB1 793 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 BBXQ8WY36 941 aaPredicted RBP9.77□□□□□ -0.85
LINC00954-202ENST00000449086 SYAP1Q96A49 352 aaPredicted RBP9.77□□□□□ -0.85
LINC00954-202ENST00000449086 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
LINC00954-202ENST00000449086 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
LINC00954-202ENST00000449086 NBPF14Q5TI25 921 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 DEFB132Q7Z7B7 95 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 FGD1P98174 961 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
LINC00954-202ENST00000449086 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
LINC00954-202ENST00000449086 SDSP20132 328 aa9.75□□□□□ -0.85
LINC00954-202ENST00000449086 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms