RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 HDAC5Q9UQL6 1122 aa18.73■□□□□ 0.59
RAB5B-202ENST00000448789 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
RAB5B-202ENST00000448789 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
RAB5B-202ENST00000448789 ZNF34Q8IZ26 560 aa18.72■□□□□ 0.59
RAB5B-202ENST00000448789 FOXO4P98177 505 aa18.71■□□□□ 0.59
RAB5B-202ENST00000448789 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
RAB5B-202ENST00000448789 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
RAB5B-202ENST00000448789 BCL11AQ9H165 835 aa18.71■□□□□ 0.59
RAB5B-202ENST00000448789 PA2G4Q9UQ80 394 aaKnown RBP18.71■□□□□ 0.59
RAB5B-202ENST00000448789 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
RAB5B-202ENST00000448789 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
RAB5B-202ENST00000448789 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
RAB5B-202ENST00000448789 PROM2Q8N271 834 aa18.7■□□□□ 0.58
RAB5B-202ENST00000448789 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
RAB5B-202ENST00000448789 SURF6O75683 361 aaKnown RBP18.69■□□□□ 0.58
RAB5B-202ENST00000448789 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
RAB5B-202ENST00000448789 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
RAB5B-202ENST00000448789 ZBTB38Q8NAP3 1195 aaPredicted RBP18.69■□□□□ 0.58
RAB5B-202ENST00000448789 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
RAB5B-202ENST00000448789 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
RAB5B-202ENST00000448789 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
RAB5B-202ENST00000448789 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
RAB5B-202ENST00000448789 SLC27A3Q5K4L6 730 aa18.68■□□□□ 0.58
RAB5B-202ENST00000448789 LMBR1LQ6UX01 489 aa18.68■□□□□ 0.58
RAB5B-202ENST00000448789 KLHDC4Q8TBB5 520 aa18.68■□□□□ 0.58
RAB5B-202ENST00000448789 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
RAB5B-202ENST00000448789 RTCBQ9Y3I0 505 aaKnown RBP18.68■□□□□ 0.58
RAB5B-202ENST00000448789 AK7Q96M32 723 aa18.67■□□□□ 0.58
RAB5B-202ENST00000448789 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
RAB5B-202ENST00000448789 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
RAB5B-202ENST00000448789 PHF14O94880 888 aa18.66■□□□□ 0.58
RAB5B-202ENST00000448789 APBA3O96018 575 aa18.66■□□□□ 0.58
RAB5B-202ENST00000448789 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
RAB5B-202ENST00000448789 ARHGEF1Q92888 912 aaKnown RBP18.66■□□□□ 0.58
RAB5B-202ENST00000448789 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
RAB5B-202ENST00000448789 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
RAB5B-202ENST00000448789 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
RAB5B-202ENST00000448789 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
RAB5B-202ENST00000448789 TRMT112Q9UI30 125 aaKnown RBP18.65■□□□□ 0.58
RAB5B-202ENST00000448789 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
RAB5B-202ENST00000448789 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
RAB5B-202ENST00000448789 FAM177BA6PVY3 158 aa18.64■□□□□ 0.58
RAB5B-202ENST00000448789 PLSCR1O15162 318 aa18.64■□□□□ 0.58
RAB5B-202ENST00000448789 C8orf34Q49A92 452 aa18.64■□□□□ 0.58
RAB5B-202ENST00000448789 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.58
RAB5B-202ENST00000448789 PLA2G12BQ9BX93 195 aa18.64■□□□□ 0.58
RAB5B-202ENST00000448789 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.58
RAB5B-202ENST00000448789 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
RAB5B-202ENST00000448789 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
RAB5B-202ENST00000448789 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
RAB5B-202ENST00000448789 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
RAB5B-202ENST00000448789 SIL1Q9H173 461 aa18.64■□□□□ 0.57
RAB5B-202ENST00000448789 ZNF652Q9Y2D9 606 aa18.64■□□□□ 0.57
RAB5B-202ENST00000448789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.64■□□□□ 0.57
RAB5B-202ENST00000448789 SALL3Q9BXA9 1300 aa18.63■□□□□ 0.57
RAB5B-202ENST00000448789 NTSR2O95665 410 aa18.63■□□□□ 0.57
RAB5B-202ENST00000448789 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
RAB5B-202ENST00000448789 CLEC4GQ6UXB4 293 aa18.63■□□□□ 0.57
RAB5B-202ENST00000448789 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
RAB5B-202ENST00000448789 IRS4O14654 1257 aaPredicted RBP18.62■□□□□ 0.57
RAB5B-202ENST00000448789 OS9Q13438 667 aaPredicted RBP18.62■□□□□ 0.57
RAB5B-202ENST00000448789 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
RAB5B-202ENST00000448789 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
RAB5B-202ENST00000448789 KIF1BPQ96EK5 621 aa18.62■□□□□ 0.57
RAB5B-202ENST00000448789 COPRSQ9NQ92 184 aa18.62■□□□□ 0.57
RAB5B-202ENST00000448789 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
RAB5B-202ENST00000448789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
RAB5B-202ENST00000448789 SASH1O94885 1247 aa18.61■□□□□ 0.57
RAB5B-202ENST00000448789 HSP90AB4PQ58FF6 505 aa18.61■□□□□ 0.57
RAB5B-202ENST00000448789 BICDL1Q6ZP65 573 aa18.61■□□□□ 0.57
RAB5B-202ENST00000448789 CCDC85AQ96PX6 553 aaPredicted RBP18.61■□□□□ 0.57
RAB5B-202ENST00000448789 UTP14AQ9BVJ6 771 aaKnown RBP18.61■□□□□ 0.57
RAB5B-202ENST00000448789 RGL2O15211 777 aa18.6■□□□□ 0.57
RAB5B-202ENST00000448789 CSF1RP07333 972 aa18.6■□□□□ 0.57
RAB5B-202ENST00000448789 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
RAB5B-202ENST00000448789 TRAPPC3LQ5T215 181 aa18.6■□□□□ 0.57
RAB5B-202ENST00000448789 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
RAB5B-202ENST00000448789 ZPR1O75312 459 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 HCLS1P14317 486 aaPredicted RBP18.59■□□□□ 0.57
RAB5B-202ENST00000448789 GSPT1P15170 499 aaKnown RBP18.59■□□□□ 0.57
RAB5B-202ENST00000448789 CTSWP56202 376 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
RAB5B-202ENST00000448789 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
RAB5B-202ENST00000448789 ADRA2BP18089 450 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 RFC4P35249 363 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 PDE1AP54750 535 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 G3BP1Q13283 466 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAB5B-202ENST00000448789 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
RAB5B-202ENST00000448789 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.56
RAB5B-202ENST00000448789 RGPD3A6NKT7 1758 aaPredicted RBP18.58■□□□□ 0.56
RAB5B-202ENST00000448789 RGPD4Q7Z3J3 1758 aa18.58■□□□□ 0.56
RAB5B-202ENST00000448789 LAMB2P55268 1798 aa18.57■□□□□ 0.56
RAB5B-202ENST00000448789 SOCS7O14512 581 aa18.57■□□□□ 0.56
RAB5B-202ENST00000448789 PDE8AO60658 829 aa18.57■□□□□ 0.56
RAB5B-202ENST00000448789 SSFA2P28290 1259 aa18.57■□□□□ 0.56
RAB5B-202ENST00000448789 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms