RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NTSR2O95665 410 aa17.89■□□□□ 0.45
GTF3C3-206ENST00000448539 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
GTF3C3-206ENST00000448539 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
GTF3C3-206ENST00000448539 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
GTF3C3-206ENST00000448539 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
GTF3C3-206ENST00000448539 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.454e-7■■■□□ 18.3
GTF3C3-206ENST00000448539 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
GTF3C3-206ENST00000448539 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
GTF3C3-206ENST00000448539 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
GTF3C3-206ENST00000448539 ALDH1L2Q3SY69 923 aa17.87■□□□□ 0.45
GTF3C3-206ENST00000448539 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
GTF3C3-206ENST00000448539 SMC4Q9NTJ3 1288 aa17.87■□□□□ 0.45
GTF3C3-206ENST00000448539 KCNA3P22001 575 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 ADCY9O60503 1353 aa17.86■□□□□ 0.45
GTF3C3-206ENST00000448539 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 TTLL6Q8N841 843 aa17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 ABCC12Q96J65 1359 aa17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 BCL2L13Q9BXK5 485 aa17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
GTF3C3-206ENST00000448539 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 SRGNP10124 158 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 STYK1Q6J9G0 422 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 ANKRD36CQ5JPF3 1778 aa17.84■□□□□ 0.45
GTF3C3-206ENST00000448539 HSP90B1P14625 803 aaKnown RBP17.83■□□□□ 0.44
GTF3C3-206ENST00000448539 NPR1P16066 1061 aa17.83■□□□□ 0.44
GTF3C3-206ENST00000448539 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.44
GTF3C3-206ENST00000448539 CNKSR1Q969H4 720 aa17.83■□□□□ 0.44
GTF3C3-206ENST00000448539 FAM89AQ96GI7 184 aa17.83■□□□□ 0.44
GTF3C3-206ENST00000448539 PTPRCP08575 1304 aa17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 KLRG2A4D1S0 409 aaPredicted RBP17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 F6X3S4 739 aa17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 ZBTB38Q8NAP3 1195 aaPredicted RBP17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
GTF3C3-206ENST00000448539 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 NEURL1BA8MQ27 555 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 RARSP54136 660 aaKnown RBP17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 ANKRD31Q8N7Z5 1873 aa17.81■□□□□ 0.44
GTF3C3-206ENST00000448539 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 C1QTNF8P60827 252 aa17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 RBM17Q96I25 401 aaKnown RBP17.8■□□□□ 0.44
GTF3C3-206ENST00000448539 CRY2Q49AN0 593 aa17.79■□□□□ 0.44
GTF3C3-206ENST00000448539 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
GTF3C3-206ENST00000448539 GCKRQ14397 625 aa17.78■□□□□ 0.44
GTF3C3-206ENST00000448539 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 BEND3Q5T5X7 828 aa17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 C3orf67Q6ZVT6 689 aa17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
GTF3C3-206ENST00000448539 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 C21orf2O43822 256 aa17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 SOGA3Q5TF21 947 aa17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
GTF3C3-206ENST00000448539 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 TNRC6CQ9HCJ0 1690 aaKnown RBP17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 PDE8AO60658 829 aa17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
GTF3C3-206ENST00000448539 H7C1W4 665 aa17.74■□□□□ 0.43
GTF3C3-206ENST00000448539 SF3B3Q15393 1217 aaKnown RBP17.74■□□□□ 0.43
GTF3C3-206ENST00000448539 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
GTF3C3-206ENST00000448539 BCAR3O75815 825 aa17.73■□□□□ 0.43
GTF3C3-206ENST00000448539 ZNF526Q8TF50 670 aaPredicted RBP17.73■□□□□ 0.43
GTF3C3-206ENST00000448539 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
GTF3C3-206ENST00000448539 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
GTF3C3-206ENST00000448539 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
GTF3C3-206ENST00000448539 ABCC4O15439 1325 aa17.72■□□□□ 0.43
GTF3C3-206ENST00000448539 GRM8O00222 908 aa17.71■□□□□ 0.43
GTF3C3-206ENST00000448539 PPEF1O14829 653 aaPredicted RBP17.71■□□□□ 0.43
GTF3C3-206ENST00000448539 GRAPQ13588 217 aa17.71■□□□□ 0.43
GTF3C3-206ENST00000448539 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms