RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 PI4KAP2A4QPH2 592 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 PI4KAP1Q8N8J0 262 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 FAM208AQ9UK61 1670 aaKnown RBP24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 RUFY2Q8WXA3 655 aa24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 DDX11Q96FC9 970 aa24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 ZKSCAN1P17029 563 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 BICD2Q8TD16 824 aa24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 LEO1Q8WVC0 666 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 PGBD1Q96JS3 809 aa24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 TTC21AQ8NDW8 1320 aa24.25■■□□□ 1.47
SMARCD2-203ENST00000448276 CCDC171Q6TFL3 1326 aa24.24■■□□□ 1.47
SMARCD2-203ENST00000448276 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
SMARCD2-203ENST00000448276 CGNQ9P2M7 1197 aaKnown RBP24.24■■□□□ 1.47
SMARCD2-203ENST00000448276 TM6SF1Q9BZW5 370 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 CLSTN2Q9H4D0 955 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 CHPF2Q9P2E5 772 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 USP6P35125 1406 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 CEBPZQ03701 1054 aaKnown RBP24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 NMIQ13287 307 aaPredicted RBP24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 IGSF1Q8N6C5 1336 aa24.23■■□□□ 1.47
SMARCD2-203ENST00000448276 CLASRPQ8N2M8 674 aaKnown RBP24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 SLC27A2O14975 620 aa24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 BEND3Q5T5X7 828 aa24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 CEP135Q66GS9 1140 aa24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 TDRD7Q8NHU6 1098 aaKnown RBP24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 ECHDC1Q9NTX5 307 aa24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 DDX41Q9UJV9 622 aaKnown RBP24.22■■□□□ 1.47
SMARCD2-203ENST00000448276 KDRP35968 1356 aa24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 ELP1O95163 1332 aa24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 USP31Q70CQ4 1352 aa24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 JAK2O60674 1132 aa24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 SIRT1Q96EB6 747 aa24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 TRMT1Q9NXH9 659 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-203ENST00000448276 TTC41PQ6P2S7 1318 aa24.2■■□□□ 1.47
SMARCD2-203ENST00000448276 IFIT2P09913 472 aaKnown RBP24.2■■□□□ 1.47
SMARCD2-203ENST00000448276 FLT4P35916 1363 aa24.2■■□□□ 1.46
SMARCD2-203ENST00000448276 KCNQ3O43525 872 aa24.2■■□□□ 1.46
SMARCD2-203ENST00000448276 FOSBP53539 338 aa24.2■■□□□ 1.46
SMARCD2-203ENST00000448276 AACSQ86V21 672 aa24.2■■□□□ 1.46
SMARCD2-203ENST00000448276 KCNB2Q92953 911 aa24.2■■□□□ 1.46
SMARCD2-203ENST00000448276 NPHP1O15259 732 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 C11orf57Q6ZUT1 292 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 KIF18AQ8NI77 898 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 ZNF215Q9UL58 517 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 SCAND2PQ9GZW5 306 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 CCDC8Q9H0W5 538 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 DDX19AQ9NUU7 478 aaKnown RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 A0A0D9SFI3 127 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 PLEKHG3A1L390 1219 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 ZBTB22O15209 634 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 TOB2Q14106 344 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 FBXW7Q969H0 707 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 PAXBP1Q9Y5B6 917 aa24.19■■□□□ 1.46
SMARCD2-203ENST00000448276 NPHP3Q7Z494 1330 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 SLFN14P0C7P3 912 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 SBNO1A3KN83 1393 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 USP42Q9H9J4 1324 aaKnown RBP24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 KMT5BQ4FZB7 885 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 BLOC1S2Q6QNY1 142 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 LRRC8AQ8IWT6 810 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 MAP4K1Q92918 833 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
SMARCD2-203ENST00000448276 RBM43Q6ZSC3 357 aaKnown RBP24.17■■□□□ 1.46
SMARCD2-203ENST00000448276 FILIP1Q7Z7B0 1213 aa24.17■■□□□ 1.46
SMARCD2-203ENST00000448276 TLR7Q9NYK1 1049 aaKnown RBP24.17■■□□□ 1.46
SMARCD2-203ENST00000448276 TECPR2O15040 1411 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 PDCP20941 246 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 SYCP1Q15431 976 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 ERCC4Q92889 916 aaPredicted RBP24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 ST7Q9NRC1 585 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 PXDNLA1KZ92 1463 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 HTATSF1O43719 755 aaKnown RBP24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 EVI5LQ96CN4 794 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 FTOQ9C0B1 505 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
SMARCD2-203ENST00000448276 KLHL34Q8N239 644 aa24.15■■□□□ 1.46
SMARCD2-203ENST00000448276 SYTL4Q96C24 671 aaPredicted RBP24.15■■□□□ 1.46
SMARCD2-203ENST00000448276 BOLA2Q9H3K6 86 aa24.15■■□□□ 1.46
SMARCD2-203ENST00000448276 MORC2Q9Y6X9 1032 aaPredicted RBP24.15■■□□□ 1.46
SMARCD2-203ENST00000448276 PPFIA3O75145 1194 aa24.14■■□□□ 1.46
SMARCD2-203ENST00000448276 LGR6Q9HBX8 967 aa24.14■■□□□ 1.46
SMARCD2-203ENST00000448276 SKILP12757 684 aa24.14■■□□□ 1.45
SMARCD2-203ENST00000448276 RPS6KB1P23443 525 aa24.14■■□□□ 1.45
SMARCD2-203ENST00000448276 IQCB1Q15051 598 aa24.14■■□□□ 1.45
SMARCD2-203ENST00000448276 ZNF589Q86UQ0 364 aaPredicted RBP24.14■■□□□ 1.45
SMARCD2-203ENST00000448276 GOLGA6L19H0YKK7 550 aa24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 ELF2Q15723 593 aa24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 BRF1Q92994 677 aa24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 EDC3Q96F86 508 aaKnown RBP24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 PSMA5P28066 241 aa24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 CWF19L2Q2TBE0 894 aaKnown RBP24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 UBR1Q8IWV7 1749 aa24.13■■□□□ 1.45
SMARCD2-203ENST00000448276 PTPN14Q15678 1187 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms