RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 NLGN2Q8NFZ4 835 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 BCL2L13Q9BXK5 485 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 PTPRCP08575 1304 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 ADCY9O60503 1353 aa16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 AFDNP55196 1824 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-209ENST00000447986 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
ERGIC3-209ENST00000447986 NTSR2O95665 410 aa16.64■□□□□ 0.25
ERGIC3-209ENST00000447986 CCDC191Q8NCU4 936 aa16.64■□□□□ 0.25
ERGIC3-209ENST00000447986 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
ERGIC3-209ENST00000447986 H0YIN7 160 aa16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 RARSP54136 660 aaKnown RBP16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
ERGIC3-209ENST00000447986 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 DPEP1P16444 411 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
ERGIC3-209ENST00000447986 SRCAPQ6ZRS2 3230 aa16.61■□□□□ 0.25
ERGIC3-209ENST00000447986 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
ERGIC3-209ENST00000447986 F6X3S4 739 aa16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 CHRNA5P30532 468 aa16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
ERGIC3-209ENST00000447986 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 GPR162Q16538 588 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 CWF19L2Q2TBE0 894 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 SLC10A5Q5PT55 438 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 FAM89AQ96GI7 184 aa16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-209ENST00000447986 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
ERGIC3-209ENST00000447986 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
ERGIC3-209ENST00000447986 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.24
ERGIC3-209ENST00000447986 MASTLQ96GX5 879 aa16.58■□□□□ 0.24
ERGIC3-209ENST00000447986 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
ERGIC3-209ENST00000447986 SRGNP10124 158 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 NPR1P16066 1061 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 BCS1LQ9Y276 419 aa16.57■□□□□ 0.24
ERGIC3-209ENST00000447986 IRS4O14654 1257 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 KCNA3P22001 575 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 GCKRQ14397 625 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 BCAR3O75815 825 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
ERGIC3-209ENST00000447986 KIAA1551Q9HCM1 1747 aa16.55■□□□□ 0.24
ERGIC3-209ENST00000447986 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
ERGIC3-209ENST00000447986 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
ERGIC3-209ENST00000447986 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
ERGIC3-209ENST00000447986 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
ERGIC3-209ENST00000447986 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
ERGIC3-209ENST00000447986 C9orf78Q9NZ63 289 aaPredicted RBP16.54■□□□□ 0.24
ERGIC3-209ENST00000447986 PDE8AO60658 829 aa16.53■□□□□ 0.24
ERGIC3-209ENST00000447986 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
ERGIC3-209ENST00000447986 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
ERGIC3-209ENST00000447986 H7C1W4 665 aa16.52■□□□□ 0.24
ERGIC3-209ENST00000447986 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.24
ERGIC3-209ENST00000447986 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-209ENST00000447986 DLEC1Q9Y238 1755 aa16.52■□□□□ 0.23
ERGIC3-209ENST00000447986 GRM8O00222 908 aa16.52■□□□□ 0.23
ERGIC3-209ENST00000447986 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.231e-10■■□□□ 11.4
ERGIC3-209ENST00000447986 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.23
ERGIC3-209ENST00000447986 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.23
ERGIC3-209ENST00000447986 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms