RNA–Protein interactions for RNA: ENST00000447933.5

LINC01006-206, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3

Gene LINC01006, Length 766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-206ENST00000447933 ZNF219Q9P2Y4 722 aaPredicted RBP19.45■□□□□ 0.7
LINC01006-206ENST00000447933 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
LINC01006-206ENST00000447933 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
LINC01006-206ENST00000447933 HOXA10P31260 410 aaPredicted RBP19.44■□□□□ 0.7
LINC01006-206ENST00000447933 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
LINC01006-206ENST00000447933 TSPYL6Q8N831 410 aa19.44■□□□□ 0.7
LINC01006-206ENST00000447933 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
LINC01006-206ENST00000447933 ISCA1Q9BUE6 129 aa19.43■□□□□ 0.7
LINC01006-206ENST00000447933 SALL2Q9Y467 1007 aaPredicted RBP19.43■□□□□ 0.7
LINC01006-206ENST00000447933 LTBP3Q9NS15 1303 aa19.43■□□□□ 0.7
LINC01006-206ENST00000447933 ZC3H4Q9UPT8 1303 aaKnown RBP19.43■□□□□ 0.7
LINC01006-206ENST00000447933 SBF1O95248 1867 aa19.43■□□□□ 0.7
LINC01006-206ENST00000447933 TNRC6CQ9HCJ0 1690 aaKnown RBP19.41■□□□□ 0.7
LINC01006-206ENST00000447933 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
LINC01006-206ENST00000447933 NLRP3Q96P20 1036 aa19.41■□□□□ 0.7
LINC01006-206ENST00000447933 TAOK3Q9H2K8 898 aa19.41■□□□□ 0.7
LINC01006-206ENST00000447933 PHAXQ9H814 394 aaKnown RBP19.41■□□□□ 0.7
LINC01006-206ENST00000447933 ARFGEF2Q9Y6D5 1785 aa19.4■□□□□ 0.7
LINC01006-206ENST00000447933 KIF3CO14782 793 aa19.4■□□□□ 0.7
LINC01006-206ENST00000447933 CCDC93Q567U6 631 aa19.4■□□□□ 0.7
LINC01006-206ENST00000447933 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
LINC01006-206ENST00000447933 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
LINC01006-206ENST00000447933 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
LINC01006-206ENST00000447933 TRMT112Q9UI30 125 aaKnown RBP19.4■□□□□ 0.7
LINC01006-206ENST00000447933 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
LINC01006-206ENST00000447933 TWISTNBQ3B726 338 aaPredicted RBP19.39■□□□□ 0.69
LINC01006-206ENST00000447933 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
LINC01006-206ENST00000447933 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.69
LINC01006-206ENST00000447933 FANCIQ9NVI1 1328 aa19.39■□□□□ 0.69
LINC01006-206ENST00000447933 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
LINC01006-206ENST00000447933 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
LINC01006-206ENST00000447933 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
LINC01006-206ENST00000447933 RTKN2Q8IZC4 609 aa19.38■□□□□ 0.69
LINC01006-206ENST00000447933 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
LINC01006-206ENST00000447933 KDM2BQ8NHM5 1336 aa19.37■□□□□ 0.69
LINC01006-206ENST00000447933 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
LINC01006-206ENST00000447933 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
LINC01006-206ENST00000447933 OLFM4Q6UX06 510 aa19.37■□□□□ 0.69
LINC01006-206ENST00000447933 NMRK2Q9NPI5 230 aa19.37■□□□□ 0.69
LINC01006-206ENST00000447933 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
LINC01006-206ENST00000447933 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
LINC01006-206ENST00000447933 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
LINC01006-206ENST00000447933 GLTPD2A6NH11 291 aa19.35■□□□□ 0.69
LINC01006-206ENST00000447933 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
LINC01006-206ENST00000447933 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
LINC01006-206ENST00000447933 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
LINC01006-206ENST00000447933 VAMP4O75379 141 aa19.34■□□□□ 0.69
LINC01006-206ENST00000447933 GRIPAP1Q4V328 841 aa19.34■□□□□ 0.69
LINC01006-206ENST00000447933 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
LINC01006-206ENST00000447933 METTL22Q9BUU2 404 aaPredicted RBP19.34■□□□□ 0.69
LINC01006-206ENST00000447933 ZNF521Q96K83 1311 aa19.33■□□□□ 0.69
LINC01006-206ENST00000447933 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
LINC01006-206ENST00000447933 SLC4A2P04920 1241 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 EXOSC9Q06265 439 aaKnown RBP19.33■□□□□ 0.68
LINC01006-206ENST00000447933 KSR2Q6VAB6 950 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 MYD88Q99836 296 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 MYH16Q9H6N6 1097 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 SNED1Q8TER0 1413 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.68
LINC01006-206ENST00000447933 ABCC4O15439 1325 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 PPEF1O14829 653 aaPredicted RBP19.32■□□□□ 0.68
LINC01006-206ENST00000447933 BBOX1O75936 387 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 CCDC191Q8NCU4 936 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 ZNF428Q96B54 188 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 PSMD1Q99460 953 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
LINC01006-206ENST00000447933 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 TOMM70O94826 608 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 SF3B3Q15393 1217 aaKnown RBP19.31■□□□□ 0.68
LINC01006-206ENST00000447933 DPY19L2Q6NUT2 758 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 G2E3Q7L622 706 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
LINC01006-206ENST00000447933 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
LINC01006-206ENST00000447933 MAP3K2Q9Y2U5 619 aa19.31■□□□□ 0.68
LINC01006-206ENST00000447933 DICER1Q9UPY3 1922 aaKnown RBP19.3■□□□□ 0.68
LINC01006-206ENST00000447933 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
LINC01006-206ENST00000447933 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
LINC01006-206ENST00000447933 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
LINC01006-206ENST00000447933 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
LINC01006-206ENST00000447933 PCCAP05165 728 aaPredicted RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 HSP90B1P14625 803 aaKnown RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 FLIIQ13045 1269 aa19.28■□□□□ 0.68
LINC01006-206ENST00000447933 GRAPQ13588 217 aa19.28■□□□□ 0.68
LINC01006-206ENST00000447933 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 SP8Q8IXZ3 490 aa19.28■□□□□ 0.68
LINC01006-206ENST00000447933 GRAPLQ8TC17 118 aaPredicted RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
LINC01006-206ENST00000447933 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
LINC01006-206ENST00000447933 VEGFAP15692 232 aaPredicted RBP19.27■□□□□ 0.68
LINC01006-206ENST00000447933 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
LINC01006-206ENST00000447933 RBM46Q8TBY0 533 aaKnown RBP19.27■□□□□ 0.68
LINC01006-206ENST00000447933 TIAM2Q8IVF5 1701 aa19.27■□□□□ 0.68
LINC01006-206ENST00000447933 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
LINC01006-206ENST00000447933 TMC4Q7Z404 712 aa19.26■□□□□ 0.67
LINC01006-206ENST00000447933 C16orf71Q8IYS4 520 aaPredicted RBP19.26■□□□□ 0.67
LINC01006-206ENST00000447933 LAMB2P55268 1798 aa19.26■□□□□ 0.67
LINC01006-206ENST00000447933 POTECB2RU33 542 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms