RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 FEZ2Q9UHY8 353 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-204ENST00000447684 ERBB3P21860 1342 aa18.87■□□□□ 0.61
CNOT3-204ENST00000447684 CRB1P82279 1406 aa18.87■□□□□ 0.61
CNOT3-204ENST00000447684 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
CNOT3-204ENST00000447684 SYT10Q6XYQ8 523 aa18.87■□□□□ 0.61
CNOT3-204ENST00000447684 ZFP91Q96JP5 570 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-204ENST00000447684 ARHGEF10O15013 1369 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 NEMFO60524 1076 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 UBTFL1P0CB47 393 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-204ENST00000447684 SLFNL1Q499Z3 407 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 PI4K2BQ8TCG2 481 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 FHOD1Q9Y613 1164 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 ELP1O95163 1332 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 FLIIQ13045 1269 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 TEX35Q5T0J7 233 aa18.86■□□□□ 0.61
CNOT3-204ENST00000447684 LARP1Q6PKG0 1096 aaKnown RBP18.86■□□□□ 0.61
CNOT3-204ENST00000447684 PNMA6AP0CW24 399 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-204ENST00000447684 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 FOXO3O43524 673 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 PDCP20941 246 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 CCZ1BP86790 482 aa18.85■□□□□ 0.61
CNOT3-204ENST00000447684 CCZ1P86791 482 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-204ENST00000447684 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
CNOT3-204ENST00000447684 SOS1Q07889 1333 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-204ENST00000447684 ZKSCAN1P17029 563 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-204ENST00000447684 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-204ENST00000447684 RHPN1Q8TCX5 695 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 PGBD1Q96JS3 809 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-204ENST00000447684 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 C3P01024 1663 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 CDC25BP30305 580 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 RNF20Q5VTR2 975 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 DDX11Q96FC9 970 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
CNOT3-204ENST00000447684 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
CNOT3-204ENST00000447684 PPP1R42Q7Z4L9 355 aa18.83■□□□□ 0.61
CNOT3-204ENST00000447684 HOMER1Q86YM7 354 aa18.83■□□□□ 0.61
CNOT3-204ENST00000447684 PLA2G4AP47712 749 aa18.83■□□□□ 0.6
CNOT3-204ENST00000447684 FOSBP53539 338 aa18.83■□□□□ 0.6
CNOT3-204ENST00000447684 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
CNOT3-204ENST00000447684 ERCC4Q92889 916 aaPredicted RBP18.83■□□□□ 0.6
CNOT3-204ENST00000447684 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.6
CNOT3-204ENST00000447684 H2AFXP16104 143 aaPredicted RBP18.82■□□□□ 0.6
CNOT3-204ENST00000447684 IQCB1Q15051 598 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 TMCO3Q6UWJ1 677 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 KRBA2Q6ZNG9 492 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
CNOT3-204ENST00000447684 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 XRN1Q8IZH2 1706 aaKnown RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 RBM43Q6ZSC3 357 aaKnown RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 PAXIP1Q6ZW49 1069 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 SETD1AO15047 1707 aaKnown RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 SEC31AO94979 1220 aaKnown RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-204ENST00000447684 UBXN4Q92575 508 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 RSPH14Q9UHP6 348 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
CNOT3-204ENST00000447684 FAM193AP78312 1265 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 ST5P78524 1137 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 C10orf67Q8IYJ2 551 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 ARGLU1Q9NWB6 273 aaPredicted RBP18.8■□□□□ 0.6
CNOT3-204ENST00000447684 KIF2AO00139 706 aaPredicted RBP18.8■□□□□ 0.6
CNOT3-204ENST00000447684 STX1AQ16623 288 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 TAF7LQ5H9L4 462 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 AOPEPQ8N6M6 819 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 USP44Q9H0E7 712 aa18.8■□□□□ 0.6
CNOT3-204ENST00000447684 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 TPM4P67936 248 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 H3BQV1 296 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 IFFO2Q5TF58 517 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 MNS1Q8NEH6 495 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.79■□□□□ 0.68e-7■■□□□ 11.5
CNOT3-204ENST00000447684 RBM8AQ9Y5S9 174 aaKnown RBP18.79■□□□□ 0.6
CNOT3-204ENST00000447684 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
CNOT3-204ENST00000447684 N4BP2Q86UW6 1770 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-204ENST00000447684 SMC2O95347 1197 aa18.78■□□□□ 0.6
CNOT3-204ENST00000447684 PPP1R13BQ96KQ4 1090 aa18.78■□□□□ 0.6
CNOT3-204ENST00000447684 FAM208AQ9UK61 1670 aaKnown RBP18.78■□□□□ 0.6
CNOT3-204ENST00000447684 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
CNOT3-204ENST00000447684 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
CNOT3-204ENST00000447684 DNAI1Q9UI46 699 aa18.78■□□□□ 0.6
CNOT3-204ENST00000447684 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 CAVIN2O95810 425 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 E4F1Q66K89 784 aaPredicted RBP18.77■□□□□ 0.6
CNOT3-204ENST00000447684 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 SMARCE1Q969G3 411 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 JAK2O60674 1132 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.6
CNOT3-204ENST00000447684 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms