RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 RLBP1P12271 317 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 GPTP24298 496 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 AAMPQ13685 434 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 FKBP8Q14318 412 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 NLRP10Q86W26 655 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 GTF2E1P29083 439 aaPredicted RBP11.61□□□□□ -0.55
CCDC18-205ENST00000447456 GCKRQ14397 625 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
CCDC18-205ENST00000447456 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 TBC1D9BQ66K14 1250 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
CCDC18-205ENST00000447456 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 COG6Q9Y2V7 657 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 ANKRD36CQ5JPF3 1778 aa11.61□□□□□ -0.55
CCDC18-205ENST00000447456 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
CCDC18-205ENST00000447456 GRM8O00222 908 aa11.6□□□□□ -0.55
CCDC18-205ENST00000447456 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
CCDC18-205ENST00000447456 UBTFL1P0CB47 393 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-205ENST00000447456 TM4SF1P30408 202 aa11.6□□□□□ -0.55
CCDC18-205ENST00000447456 NFIXQ14938 502 aa11.6□□□□□ -0.55
CCDC18-205ENST00000447456 TPTE2Q6XPS3 522 aa11.6□□□□□ -0.55
CCDC18-205ENST00000447456 NBPF5PQ86XG9 351 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-205ENST00000447456 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-205ENST00000447456 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CCDC18-205ENST00000447456 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
CCDC18-205ENST00000447456 AFDNP55196 1824 aaKnown RBP11.59□□□□□ -0.55
CCDC18-205ENST00000447456 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
CCDC18-205ENST00000447456 MMP10P09238 476 aa11.59□□□□□ -0.55
CCDC18-205ENST00000447456 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
CCDC18-205ENST00000447456 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
CCDC18-205ENST00000447456 UBN2Q6ZU65 1347 aa11.59□□□□□ -0.55
CCDC18-205ENST00000447456 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
CCDC18-205ENST00000447456 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
CCDC18-205ENST00000447456 H7C1W4 665 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 GNAI2P04899 355 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 POLD1P28340 1107 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 ST5P78524 1137 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 UBE3BQ7Z3V4 1068 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 USP44Q9H0E7 712 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 UTYO14607 1347 aa11.58□□□□□ -0.56
CCDC18-205ENST00000447456 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 ZBTB7BO15156 539 aaPredicted RBP11.57□□□□□ -0.56
CCDC18-205ENST00000447456 NTSR2O95665 410 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 SERPINB2P05120 415 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 ERICH6BQ5W0A0 696 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 FAM89AQ96GI7 184 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 MEIS3Q99687 375 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 CDHR2Q9BYE9 1310 aa11.57□□□□□ -0.56
CCDC18-205ENST00000447456 POLRMTO00411 1230 aaKnown RBP11.56□□□□□ -0.56
CCDC18-205ENST00000447456 IRS4O14654 1257 aaPredicted RBP11.56□□□□□ -0.56
CCDC18-205ENST00000447456 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
CCDC18-205ENST00000447456 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
CCDC18-205ENST00000447456 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
CCDC18-205ENST00000447456 PDGFDQ9GZP0 370 aaPredicted RBP11.56□□□□□ -0.56
CCDC18-205ENST00000447456 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
CCDC18-205ENST00000447456 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
CCDC18-205ENST00000447456 NBPF7P0C2Y1 421 aaPredicted RBP11.55□□□□□ -0.56
CCDC18-205ENST00000447456 DDR1Q08345 913 aa11.55□□□□□ -0.56
CCDC18-205ENST00000447456 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
CCDC18-205ENST00000447456 PDE8AO60658 829 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 CASP7P55210 303 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 NUTM1Q86Y26 1132 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 EXOC6Q8TAG9 804 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 SPON1Q9HCB6 807 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
CCDC18-205ENST00000447456 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-205ENST00000447456 LRRFIP2Q9Y608 721 aaKnown RBP11.54□□□□□ -0.56
CCDC18-205ENST00000447456 HCLS1P14317 486 aaPredicted RBP11.53□□□□□ -0.56
CCDC18-205ENST00000447456 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
CCDC18-205ENST00000447456 BRIP1Q9BX63 1249 aa11.53□□□□□ -0.56
CCDC18-205ENST00000447456 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
CCDC18-205ENST00000447456 HMMRO75330 724 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 PDE6BP35913 854 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 CTSWP56202 376 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 CCDC152Q4G0S7 254 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.57
CCDC18-205ENST00000447456 SUCLG2Q96I99 432 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
CCDC18-205ENST00000447456 KCNA4P22459 653 aa11.51□□□□□ -0.57
CCDC18-205ENST00000447456 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
CCDC18-205ENST00000447456 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
CCDC18-205ENST00000447456 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
CCDC18-205ENST00000447456 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 FOXO4P98177 505 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 MTX1Q13505 466 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 SF3B3Q15393 1217 aaKnown RBP11.5□□□□□ -0.57
CCDC18-205ENST00000447456 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 RABL6Q3YEC7 729 aaPredicted RBP11.5□□□□□ -0.57
CCDC18-205ENST00000447456 RPGRQ92834 1020 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms