RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ADCY9O60503 1353 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 H0YIN7 160 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 PDE6BP35913 854 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 FLIIQ13045 1269 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 PARP10Q53GL7 1025 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 NLRP10Q86W26 655 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 PIM2Q9P1W9 311 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.04
RFC4-208ENST00000447345 UTRNP46939 3433 aa15.26■□□□□ 0.03
RFC4-208ENST00000447345 PI4KAP2A4QPH2 592 aa15.26■□□□□ 0.03
RFC4-208ENST00000447345 FKBP5Q13451 457 aaPredicted RBP15.26■□□□□ 0.03
RFC4-208ENST00000447345 PI4KAP1Q8N8J0 262 aa15.26■□□□□ 0.03
RFC4-208ENST00000447345 ZNF622Q969S3 477 aaKnown RBP eCLIP15.26■□□□□ 0.034e-10■□□□□ 8.7
RFC4-208ENST00000447345 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
RFC4-208ENST00000447345 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
RFC4-208ENST00000447345 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
RFC4-208ENST00000447345 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
RFC4-208ENST00000447345 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
RFC4-208ENST00000447345 ISCA1Q9BUE6 129 aa15.25■□□□□ 0.03
RFC4-208ENST00000447345 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
RFC4-208ENST00000447345 TRMT112Q9UI30 125 aaKnown RBP15.25■□□□□ 0.03
RFC4-208ENST00000447345 SBF1O95248 1867 aa15.25■□□□□ 0.03
RFC4-208ENST00000447345 TRMT2AQ8IZ69 625 aaKnown RBP15.24■□□□□ 0.03
RFC4-208ENST00000447345 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
RFC4-208ENST00000447345 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
RFC4-208ENST00000447345 FER1L6Q2WGJ9 1857 aa15.24■□□□□ 0.03
RFC4-208ENST00000447345 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
RFC4-208ENST00000447345 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
RFC4-208ENST00000447345 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
RFC4-208ENST00000447345 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 SH3TC1Q8TE82 1336 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 SRGNP10124 158 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
RFC4-208ENST00000447345 C3orf67Q6ZVT6 689 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 TIAM2Q8IVF5 1701 aa15.22■□□□□ 0.03
RFC4-208ENST00000447345 RNF123Q5XPI4 1314 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 F6X3S4 739 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
RFC4-208ENST00000447345 SSH1Q8WYL5 1049 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 JARID2Q92833 1246 aaPredicted RBP15.21■□□□□ 0.03
RFC4-208ENST00000447345 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
RFC4-208ENST00000447345 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 MASTLQ96GX5 879 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
RFC4-208ENST00000447345 NPR1P16066 1061 aa15.2■□□□□ 0.02
RFC4-208ENST00000447345 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
RFC4-208ENST00000447345 PRPF40BQ6NWY9 871 aaKnown RBP15.2■□□□□ 0.02
RFC4-208ENST00000447345 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
RFC4-208ENST00000447345 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
RFC4-208ENST00000447345 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
RFC4-208ENST00000447345 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
RFC4-208ENST00000447345 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
RFC4-208ENST00000447345 IGKV5-2P06315 115 aa15.19■□□□□ 0.02
RFC4-208ENST00000447345 CCDC191Q8NCU4 936 aa15.19■□□□□ 0.02
RFC4-208ENST00000447345 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
RFC4-208ENST00000447345 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
RFC4-208ENST00000447345 COL4A1P02462 1669 aa15.19■□□□□ 0.02
RFC4-208ENST00000447345 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
RFC4-208ENST00000447345 KLRG2A4D1S0 409 aaPredicted RBP15.18■□□□□ 0.02
RFC4-208ENST00000447345 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
RFC4-208ENST00000447345 C21orf2O43822 256 aa15.18■□□□□ 0.02
RFC4-208ENST00000447345 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
RFC4-208ENST00000447345 CRY2Q49AN0 593 aa15.18■□□□□ 0.02
RFC4-208ENST00000447345 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
RFC4-208ENST00000447345 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
RFC4-208ENST00000447345 YY1P25490 414 aa15.17■□□□□ 0.02
RFC4-208ENST00000447345 RASSF7Q02833 373 aa15.17■□□□□ 0.02
RFC4-208ENST00000447345 SLC10A5Q5PT55 438 aa15.17■□□□□ 0.02
RFC4-208ENST00000447345 ZBTB38Q8NAP3 1195 aaPredicted RBP15.17■□□□□ 0.02
RFC4-208ENST00000447345 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
RFC4-208ENST00000447345 CT47B1P0C2W7 299 aaPredicted RBP15.16■□□□□ 0.02
RFC4-208ENST00000447345 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
RFC4-208ENST00000447345 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
RFC4-208ENST00000447345 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
RFC4-208ENST00000447345 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
RFC4-208ENST00000447345 UBE3BQ7Z3V4 1068 aa15.15■□□□□ 0.02
RFC4-208ENST00000447345 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
RFC4-208ENST00000447345 RBM17Q96I25 401 aaKnown RBP15.15■□□□□ 0.02
RFC4-208ENST00000447345 ABCC4O15439 1325 aa15.15■□□□□ 0.02
RFC4-208ENST00000447345 PTPRCP08575 1304 aa15.15■□□□□ 0.02
RFC4-208ENST00000447345 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
RFC4-208ENST00000447345 RARSP54136 660 aaKnown RBP15.14■□□□□ 0.01
RFC4-208ENST00000447345 GCKRQ14397 625 aa15.14■□□□□ 0.01
RFC4-208ENST00000447345 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
RFC4-208ENST00000447345 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
RFC4-208ENST00000447345 PPEF1O14829 653 aaPredicted RBP15.13■□□□□ 0.01
RFC4-208ENST00000447345 HOXA10P31260 410 aaPredicted RBP15.13■□□□□ 0.01
RFC4-208ENST00000447345 BEND3Q5T5X7 828 aa15.13■□□□□ 0.01
RFC4-208ENST00000447345 CDHR2Q9BYE9 1310 aa15.13■□□□□ 0.01
RFC4-208ENST00000447345 NFKBIEO00221 500 aa15.12■□□□□ 0.01
RFC4-208ENST00000447345 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
RFC4-208ENST00000447345 DDX46Q7L014 1031 aaKnown RBP15.12■□□□□ 0.01
RFC4-208ENST00000447345 CRAMP1Q96RY5 1269 aa15.12■□□□□ 0.01
RFC4-208ENST00000447345 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
RFC4-208ENST00000447345 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
RFC4-208ENST00000447345 PDE8AO60658 829 aa15.11■□□□□ 0.01
RFC4-208ENST00000447345 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms