RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 GOLIM4O00461 696 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
ZNF550-204ENST00000447310 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
ZNF550-204ENST00000447310 SKIDA1Q1XH10 827 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 CUL4AQ13619 759 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 CWC15Q9P013 229 aaKnown RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 A0A087WZG4 1122 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 GRM8O00222 908 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 IFIT1P09914 478 aaKnown RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
ZNF550-204ENST00000447310 HAND2P61296 217 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 FLT4P35916 1363 aa13.09□□□□□ -0.31
ZNF550-204ENST00000447310 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 CCDC70Q6NSX1 233 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 CDC37L1Q7L3B6 337 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 CABP4P57796 275 aa13.08□□□□□ -0.32
ZNF550-204ENST00000447310 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 CLEC17AQ6ZS10 378 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 NOC3LQ8WTT2 800 aaKnown RBP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 AK7Q96M32 723 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 LIG1P18858 919 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 LRMPQ12912 555 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 PDLIM2Q96JY6 352 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 UNC13BO14795 1591 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 CLTCL1P53675 1640 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 SART3Q15020 963 aaKnown RBP13.07□□□□□ -0.32
ZNF550-204ENST00000447310 ME3Q16798 604 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 LEKR1Q6ZMV7 388 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 FEZ1Q99689 392 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 AOX1Q06278 1338 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
ZNF550-204ENST00000447310 SLU7O95391 586 aaKnown RBP13.06□□□□□ -0.32
ZNF550-204ENST00000447310 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
ZNF550-204ENST00000447310 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 PTH1RQ03431 593 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 LEO1Q8WVC0 666 aaPredicted RBP13.06□□□□□ -0.32
ZNF550-204ENST00000447310 OGFRQ9NZT2 677 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 SLC27A2O14975 620 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
ZNF550-204ENST00000447310 ZNF75DP51815 510 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
ZNF550-204ENST00000447310 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
ZNF550-204ENST00000447310 RGS12O14924 1447 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
ZNF550-204ENST00000447310 CDKL5O76039 1030 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 XBP1P17861 261 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
ZNF550-204ENST00000447310 HSP90AA4PQ58FG1 418 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 LINS1Q8NG48 757 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 MRPS27Q92552 414 aaKnown RBP13.05□□□□□ -0.32
ZNF550-204ENST00000447310 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 SMARCE1Q969G3 411 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 EVA1CP58658 441 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
ZNF550-204ENST00000447310 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
ZNF550-204ENST00000447310 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
ZNF550-204ENST00000447310 KLHL10Q6JEL2 608 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms