RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 SETDB2Q96T68 719 aa22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 CWC25Q9NXE8 425 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 DDR1Q08345 913 aa22.73■■□□□ 1.23
TRAPPC4-203ENST00000447216 GCKRQ14397 625 aa22.73■■□□□ 1.23
TRAPPC4-203ENST00000447216 CCDC191Q8NCU4 936 aa22.73■■□□□ 1.23
TRAPPC4-203ENST00000447216 CRBNQ96SW2 442 aa22.73■■□□□ 1.23
TRAPPC4-203ENST00000447216 MMP10P09238 476 aa22.72■■□□□ 1.23
TRAPPC4-203ENST00000447216 MVPQ14764 893 aaKnown RBP22.72■■□□□ 1.23
TRAPPC4-203ENST00000447216 PARP10Q53GL7 1025 aa22.72■■□□□ 1.23
TRAPPC4-203ENST00000447216 ATF5Q9Y2D1 282 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC4-203ENST00000447216 RTL5Q5HYW3 569 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-203ENST00000447216 CARMIL3Q8ND23 1372 aa22.71■■□□□ 1.23
TRAPPC4-203ENST00000447216 POLRMTO00411 1230 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-203ENST00000447216 NTSR2O95665 410 aa22.7■■□□□ 1.22
TRAPPC4-203ENST00000447216 SYNE4Q8N205 404 aa22.7■■□□□ 1.22
TRAPPC4-203ENST00000447216 TRMT112Q9UI30 125 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-203ENST00000447216 NRXN2Q9P2S2 1712 aa22.7■■□□□ 1.22
TRAPPC4-203ENST00000447216 MYH3P11055 1940 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 DDX60Q8IY21 1712 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 SERPINB2P05120 415 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 NBPF5PQ86XG9 351 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 MEIS3Q99687 375 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 MTFR1LQ9H019 292 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 USP44Q9H0E7 712 aa22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 C9orf78Q9NZ63 289 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC4-203ENST00000447216 GRM8O00222 908 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 UBE3BQ7Z3V4 1068 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 NUTM1Q86Y26 1132 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 LAMB2P55268 1798 aa22.68■■□□□ 1.22
TRAPPC4-203ENST00000447216 PCCAP05165 728 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-203ENST00000447216 NBPF7P0C2Y1 421 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC4-203ENST00000447216 PARP3Q9Y6F1 533 aa22.67■■□□□ 1.22
TRAPPC4-203ENST00000447216 H7C1W4 665 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 CASP7P55210 303 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 ERFEQ4G0M1 354 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 ZBTB38Q8NAP3 1195 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 EXOC6Q8TAG9 804 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 DDX19BQ9UMR2 479 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 ANKRD31Q8N7Z5 1873 aa22.66■■□□□ 1.22
TRAPPC4-203ENST00000447216 IBTKQ9P2D0 1353 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-203ENST00000447216 ZBTB7BO15156 539 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-203ENST00000447216 NPHP1O15259 732 aa22.65■■□□□ 1.22
TRAPPC4-203ENST00000447216 NYXQ9GZU5 481 aa22.65■■□□□ 1.22
TRAPPC4-203ENST00000447216 ABCC12Q96J65 1359 aa22.64■■□□□ 1.22
TRAPPC4-203ENST00000447216 SH3TC1Q8TE82 1336 aa22.64■■□□□ 1.22
TRAPPC4-203ENST00000447216 GTF2E1P29083 439 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC4-203ENST00000447216 PRR5LQ6MZQ0 368 aa22.64■■□□□ 1.21
TRAPPC4-203ENST00000447216 CNBD1Q8NA66 436 aa22.64■■□□□ 1.21
TRAPPC4-203ENST00000447216 TNRC6CQ9HCJ0 1690 aaKnown RBP22.64■■□□□ 1.21
TRAPPC4-203ENST00000447216 UTYO14607 1347 aa22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 UBTFL1P0CB47 393 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 HCLS1P14317 486 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 SUCLG2Q96I99 432 aa22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
TRAPPC4-203ENST00000447216 GNAI3P08754 354 aa22.62■■□□□ 1.21
TRAPPC4-203ENST00000447216 CDHR2Q9BYE9 1310 aa22.61■■□□□ 1.21
TRAPPC4-203ENST00000447216 IRS4O14654 1257 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC4-203ENST00000447216 NEFLP07196 543 aa22.61■■□□□ 1.21
TRAPPC4-203ENST00000447216 POLD1P28340 1107 aa22.61■■□□□ 1.21
TRAPPC4-203ENST00000447216 LRRFIP2Q9Y608 721 aaKnown RBP22.61■■□□□ 1.21
TRAPPC4-203ENST00000447216 PTGER2P43116 358 aa22.6■■□□□ 1.21
TRAPPC4-203ENST00000447216 ST5P78524 1137 aa22.6■■□□□ 1.21
TRAPPC4-203ENST00000447216 SGIP1Q9BQI5 828 aa22.6■■□□□ 1.21
TRAPPC4-203ENST00000447216 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
TRAPPC4-203ENST00000447216 EPHA10Q5JZY3 1008 aa22.59■■□□□ 1.21
TRAPPC4-203ENST00000447216 KAZALD1Q96I82 304 aa22.59■■□□□ 1.21
TRAPPC4-203ENST00000447216 TAF1P21675 1872 aa22.59■■□□□ 1.21
TRAPPC4-203ENST00000447216 C3orf67Q6ZVT6 689 aa22.58■■□□□ 1.21
TRAPPC4-203ENST00000447216 SPON1Q9HCB6 807 aa22.58■■□□□ 1.21
TRAPPC4-203ENST00000447216 KIF13BQ9NQT8 1826 aa22.58■■□□□ 1.21
TRAPPC4-203ENST00000447216 GNAI2P04899 355 aa22.57■■□□□ 1.2
TRAPPC4-203ENST00000447216 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
TRAPPC4-203ENST00000447216 BICC1Q9H694 974 aaKnown RBP22.57■■□□□ 1.2
TRAPPC4-203ENST00000447216 COL11A2P13942 1736 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC4-203ENST00000447216 PDE8AO60658 829 aa22.56■■□□□ 1.2
TRAPPC4-203ENST00000447216 FOXO4P98177 505 aa22.56■■□□□ 1.2
TRAPPC4-203ENST00000447216 PLA2G12BQ9BX93 195 aa22.56■■□□□ 1.2
TRAPPC4-203ENST00000447216 CHMP4BQ9H444 224 aaKnown RBP22.56■■□□□ 1.2
TRAPPC4-203ENST00000447216 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
TRAPPC4-203ENST00000447216 CCDC85AQ96PX6 553 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-203ENST00000447216 C10orf71Q711Q0 1435 aa22.55■■□□□ 1.2
TRAPPC4-203ENST00000447216 SPEF2Q9C093 1822 aa22.54■■□□□ 1.2
TRAPPC4-203ENST00000447216 CACNA1SQ13698 1873 aa22.54■■□□□ 1.2
TRAPPC4-203ENST00000447216 CTSWP56202 376 aa22.54■■□□□ 1.2
TRAPPC4-203ENST00000447216 RIC1Q4ADV7 1423 aa22.54■■□□□ 1.2
TRAPPC4-203ENST00000447216 LMBR1LQ6UX01 489 aa22.53■■□□□ 1.2
TRAPPC4-203ENST00000447216 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
TRAPPC4-203ENST00000447216 HDAC5Q9UQL6 1122 aa22.53■■□□□ 1.2
TRAPPC4-203ENST00000447216 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
TRAPPC4-203ENST00000447216 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
TRAPPC4-203ENST00000447216 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
TRAPPC4-203ENST00000447216 KIAA1551Q9HCM1 1747 aa22.51■■□□□ 1.19
TRAPPC4-203ENST00000447216 KLHL34Q8N239 644 aa22.51■■□□□ 1.19
TRAPPC4-203ENST00000447216 TTLL11Q8NHH1 800 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms