RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CDCA7Q9BWT1 371 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 DIAPH3Q9NSV4 1193 aa11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 BCL9O00512 1426 aa11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 PALD1Q9ULE6 856 aa11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 COL22A1Q8NFW1 1626 aaPredicted RBP11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 CYP19A1P11511 503 aaPredicted RBP11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 GPTP24298 496 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 NEK4P51957 841 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 EVI5LQ96CN4 794 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
COL6A4P1-201ENST00000446690 SGSM2O43147 1006 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 HLFQ16534 295 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 NEUROD6Q96NK8 337 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
COL6A4P1-201ENST00000446690 RUFY2Q8WXA3 655 aa11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 COL15A1P39059 1388 aa11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-201ENST00000446690 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 LRRC24Q50LG9 513 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 DDIT3P35638 169 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 TIMM10P62072 90 aa11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-201ENST00000446690 HSPA4P34932 840 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 ANAPC15P60006 121 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 ZBTB38Q8NAP3 1195 aaPredicted RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 FAM227BQ96M60 508 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 LSG1Q9H089 658 aaKnown RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 KCNQ2O43526 872 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
COL6A4P1-201ENST00000446690 EYA2O00167 538 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 PTH1RQ03431 593 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 NMIQ13287 307 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 RAD50Q92878 1312 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 HIP1O00291 1037 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 ATP5JP18859 108 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 MCM4P33991 863 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 IL6STP40189 918 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 TUBGCP6Q96RT7 1819 aa11.51□□□□□ -0.57
COL6A4P1-201ENST00000446690 ITGB4P16144 1822 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 KCNJ4P48050 445 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 SIK1P57059 783 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 IFIT5Q13325 482 aaKnown RBP11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 GSE1Q14687 1217 aa11.5□□□□□ -0.57
COL6A4P1-201ENST00000446690 EPB41L2O43491 1005 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 ZGPATQ8N5A5 531 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 CEP126Q9P2H0 1117 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 RAB3GAP1Q15042 981 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms